cmake_minimum_required(VERSION 3.15)
project(snplib LANGUAGES CXX)

set(CMAKE_CXX_STANDARD 17)
set(CMAKE_CXX_STANDARD_REQUIRED ON)

option(USE_MKL "Use Intel MKL" OFF)
option(USE_OPENBLAS "Use OpenBLAS" OFF)

if(USE_MKL)
    find_package(MKL REQUIRED)
    if(MKL_FOUND)
        include_directories(${MKL_INCLUDE_DIRS})
        link_libraries(${MKL_LIBRARIES})
    endif()
elseif(USE_OPENBLAS)
    find_package(OpenBLAS REQUIRED)
    if(OPENBLAS_FOUND)
        include_directories(${OPENBLAS_INCLUDE_DIRS})
        link_libraries(${OPENBLAS_LIBRARIES})
    endif()
endif()

include_directories(src)

add_library(snplib
    src/data_manage.cc
    src/grm.cc
    src/ibs.cc
    src/king.cc
    src/snp.cc
    src/statistics.cc
    src/ugrm.cc
)

target_include_directories(snplib PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}/src)

# Example executable
add_executable(example main.cc)
target_link_libraries(example snplib)