diff --git a/delphi_fork/labels.csv b/delphi_fork/labels.csv new file mode 100644 index 0000000..bf3b573 --- /dev/null +++ b/delphi_fork/labels.csv @@ -0,0 +1,1270 @@ +Padding +No event +Female +Male +BMI_low +BMI_mid +BMI_high +Smoking_low +Smoking_mid +Smoking_high +Alcohol_low +Alcohol_mid +Alcohol_high +A00 (cholera) +A01 (typhoid and paratyphoid fevers) +A02 (other salmonella infections) +A03 (shigellosis) +A04 (other bacterial intestinal infections) +A05 (other bacterial foodborne intoxications) +A06 (amoebiasis) +A07 (other protozoal intestinal diseases) +A08 (viral and other specified intestinal infections) +A09 (diarrhoea and gastro-enteritis of presumed infectious origin) +A15 (respiratory tuberculosis, bacteriologically and histologically confirmed) +A16 (respiratory tuberculosis, not confirmed bacteriologically or histologically) +A17 (tuberculosis of nervous system) +A18 (tuberculosis of other organs) +A19 (miliary tuberculosis) +A20 (plague) +A22 (anthrax) +A23 (brucellosis) +A24 (glanders and melioidosis) +A25 (rat-bite fevers) +A26 (erysipeloid) +A27 (leptospirosis) +A28 (other zoonotic bacterial diseases, not elsewhere classified) +A30 (leprosy [hansen's disease]) +A31 (infection due to other mycobacteria) +A32 (listeriosis) +A33 (tetanus neonatorum) +A35 (other tetanus) +A36 (diphtheria) +A37 (whooping cough) +A38 (scarlet fever) +A39 (meningococcal infection) +A40 (streptococcal septicaemia) +A41 (other septicaemia) +A42 (actinomycosis) +A43 (nocardiosis) +A44 (bartonellosis) +A46 (erysipelas) +A48 (other bacterial diseases, not elsewhere classified) +A49 (bacterial infection of unspecified site) +A50 (congenital syphilis) +A51 (early syphilis) +A52 (late syphilis) +A53 (other and unspecified syphilis) +A54 (gonococcal infection) +A55 (chlamydial lymphogranuloma (venereum)) +A56 (other sexually transmitted chlamydial diseases) +A58 (granuloma inguinale) +A59 (trichomoniasis) +A60 (anogenital herpesviral [herpes simplex] infections) +A63 (other predominantly sexually transmitted diseases, not elsewhere classified) +A64 (unspecified sexually transmitted disease) +A66 (yaws) +A67 (pinta [carate]) +A68 (relapsing fevers) +A69 (other spirochaetal infections) +A70 (chlamydia psittaci infection) +A71 (trachoma) +A74 (other diseases caused by chlamydiae) +A75 (typhus fever) +A77 (spotted fever [tick-borne rickettsioses]) +A78 (q fever) +A79 (other rickettsioses) +A80 (acute poliomyelitis) +A81 (atypical virus infections of central nervous system) +A82 (rabies) +A83 (mosquito-borne viral encephalitis) +A84 (tick-borne viral encephalitis) +A85 (other viral encephalitis, not elsewhere classified) +A86 (unspecified viral encephalitis) +A87 (viral meningitis) +A88 (other viral infections of central nervous system, not elsewhere classified) +A89 (unspecified viral infection of central nervous system) +A90 (dengue fever [classical dengue]) +A91 (dengue haemorrhagic fever) +A92 (other mosquito-borne viral fevers) +A93 (other arthropod-borne viral fevers, not elsewhere classified) +A94 (unspecified arthropod-borne viral fever) +A95 (yellow fever) +A97 (dengue) +A98 (other viral haemorrhagic fevers, not elsewhere classified) +B00 (herpesviral [herpes simplex] infections) +B01 (varicella [chickenpox]) +B02 (zoster [herpes zoster]) +B03 (smallpox) +B05 (measles) +B06 (rubella [german measles]) +B07 (viral warts) +B08 (other viral infections characterised by skin and mucous membrane lesions, not elsewhere classified) +B09 (unspecified viral infection characterised by skin and mucous membrane lesions) +B15 (acute hepatitis a) +B16 (acute hepatitis b) +B17 (other acute viral hepatitis) +B18 (chronic viral hepatitis) +B19 (unspecified viral hepatitis) +B20 (human immunodeficiency virus [hiv] disease resulting in infectious and parasitic diseases) +B21 (human immunodeficiency virus [hiv] disease resulting in malignant neoplasms) +B22 (human immunodeficiency virus [hiv] disease resulting in other specified diseases) +B23 (human immunodeficiency virus [hiv] disease resulting in other conditions) +B24 (unspecified human immunodeficiency virus [hiv] disease) +B25 (cytomegaloviral disease) +B26 (mumps) +B27 (infectious mononucleosis) +B30 (viral conjunctivitis) +B33 (other viral diseases, not elsewhere classified) +B34 (viral infection of unspecified site) +B35 (dermatophytosis) +B36 (other superficial mycoses) +B37 (candidiasis) +B38 (coccidioidomycosis) +B39 (histoplasmosis) +B40 (blastomycosis) +B42 (sporotrichosis) +B43 (chromomycosis and phaeomycotic abscess) +B44 (aspergillosis) +B45 (cryptococcosis) +B46 (zygomycosis) +B47 (mycetoma) +B48 (other mycoses, not elsewhere classified) +B49 (unspecified mycosis) +B50 (plasmodium falciparum malaria) +B51 (plasmodium vivax malaria) +B52 (plasmodium malariae malaria) +B53 (other parasitologically confirmed malaria) +B54 (unspecified malaria) +B55 (leishmaniasis) +B57 (chagas' disease) +B58 (toxoplasmosis) +B59 (pneumocystosis) +B60 (other protozoal diseases, not elsewhere classified) +B65 (schistosomiasis [bilharziasis]) +B66 (other fluke infections) +B67 (echinococcosis) +B68 (taeniasis) +B69 (cysticercosis) +B71 (other cestode infections) +B73 (onchocerciasis) +B74 (filariasis) +B75 (trichinellosis) +B76 (hookworm diseases) +B77 (ascariasis) +B78 (strongyloidiasis) +B79 (trichuriasis) +B80 (enterobiasis) +B81 (other intestinal helminthiases, not elsewhere classified) +B82 (unspecified intestinal parasitism) +B83 (other helminthiases) +B85 (pediculosis and phthiriasis) +B86 (scabies) +B87 (myiasis) +B88 (other infestations) +B89 (unspecified parasitic disease) +B90 (sequelae of tuberculosis) +B91 (sequelae of poliomyelitis) +B94 (sequelae of other and unspecified infectious and parasitic diseases) +B95 (streptococcus and staphylococcus as the cause of diseases classified to other chapters) +B96 (other bacterial agents as the cause of diseases classified to other chapters) +B97 (viral agents as the cause of diseases classified to other chapters) +B98 (other specified infectious agents as the cause of diseases classified to other chapters) +B99 (other and unspecified infectious diseases) +D50 (iron deficiency anaemia) +D51 (vitamin b12 deficiency anaemia) +D52 (folate deficiency anaemia) +D53 (other nutritional anaemias) +D55 (anaemia due to enzyme disorders) +D56 (thalassaemia) +D57 (sickle-cell disorders) +D58 (other hereditary haemolytic anaemias) +D59 (acquired haemolytic anaemia) +D60 (acquired pure red cell aplasia [erythroblastopenia]) +D61 (other aplastic anaemias) +D62 (acute posthaemorrhagic anaemia) +D63 (anaemia in chronic diseases classified elsewhere) +D64 (other anaemias) +D65 (disseminated intravascular coagulation [defibrination syndrome]) +D66 (hereditary factor viii deficiency) +D67 (hereditary factor ix deficiency) +D68 (other coagulation defects) +D69 (purpura and other haemorrhagic conditions) +D70 (agranulocytosis) +D71 (functional disorders of polymorphonuclear neutrophils) +D72 (other disorders of white blood cells) +D73 (diseases of spleen) +D74 (methaemoglobinaemia) +D75 (other diseases of blood and blood-forming organs) +D76 (certain diseases involving lymphoreticular tissue and reticulohistiocytic system) +D77 (other disorders of blood and blood-forming organs in diseases classified elsewhere) +D80 (immunodeficiency with predominantly antibody defects) +D81 (combined immunodeficiencies) +D82 (immunodeficiency associated with other major defects) +D83 (common variable immunodeficiency) +D84 (other immunodeficiencies) +D86 (sarcoidosis) +D89 (other disorders involving the immune mechanism, not elsewhere classified) +E01 (iodine-deficiency-related thyroid disorders and allied conditions) +E02 (subclinical iodine-deficiency hypothyroidism) +E03 (other hypothyroidism) +E04 (other non-toxic goitre) +E05 (thyrotoxicosis [hyperthyroidism]) +E06 (thyroiditis) +E07 (other disorders of thyroid) +E10 (insulin-dependent diabetes mellitus) +E11 (non-insulin-dependent diabetes mellitus) +E12 (malnutrition-related diabetes mellitus) +E13 (other specified diabetes mellitus) +E14 (unspecified diabetes mellitus) +E15 (nondiabetic hypoglycaemic coma) +E16 (other disorders of pancreatic internal secretion) +E20 (hypoparathyroidism) +E21 (hyperparathyroidism and other disorders of parathyroid gland) +E22 (hyperfunction of pituitary gland) +E23 (hypofunction and other disorders of pituitary gland) +E24 (cushing's syndrome) +E25 (adrenogenital disorders) +E26 (hyperaldosteronism) +E27 (other disorders of adrenal gland) +E28 (ovarian dysfunction) +E29 (testicular dysfunction) +E30 (disorders of puberty, not elsewhere classified) +E31 (polyglandular dysfunction) +E32 (diseases of thymus) +E34 (other endocrine disorders) +E35 (disorders of endocrine glands in diseases classified elsewhere) +E41 (nutritional marasmus) +E43 (unspecified severe protein-energy malnutrition) +E44 (protein-energy malnutrition of moderate and mild degree) +E45 (retarded development following protein-energy malnutrition) +E46 (unspecified protein-energy malnutrition) +E50 (vitamin a deficiency) +E51 (thiamine deficiency) +E52 (niacin deficiency [pellagra]) +E53 (deficiency of other b group vitamins) +E54 (ascorbic acid deficiency) +E55 (vitamin d deficiency) +E56 (other vitamin deficiencies) +E58 (dietary calcium deficiency) +E59 (dietary selenium deficiency) +E60 (dietary zinc deficiency) +E61 (deficiency of other nutrient elements) +E63 (other nutritional deficiencies) +E64 (sequelae of malnutrition and other nutritional deficiencies) +E65 (localised adiposity) +E66 (obesity) +E67 (other hyperalimentation) +E68 (sequelae of hyperalimentation) +E70 (disorders of aromatic amino-acid metabolism) +E71 (disorders of branched-chain amino-acid metabolism and fatty-acid metabolism) +E72 (other disorders of amino-acid metabolism) +E73 (lactose intolerance) +E74 (other disorders of carbohydrate metabolism) +E75 (disorders of sphingolipid metabolism and other lipid storage disorders) +E76 (disorders of glycosaminoglycan metabolism) +E77 (disorders of glycoprotein metabolism) +E78 (disorders of lipoprotein metabolism and other lipidaemias) +E79 (disorders of purine and pyrimidine metabolism) +E80 (disorders of porphyrin and bilirubin metabolism) +E83 (disorders of mineral metabolism) +E84 (cystic fibrosis) +E85 (amyloidosis) +E86 (volume depletion) +E87 (other disorders of fluid, electrolyte and acid-base balance) +E88 (other metabolic disorders) +E89 (postprocedural endocrine and metabolic disorders, not elsewhere classified) +F00 (dementia in alzheimer's disease) +F01 (vascular dementia) +F02 (dementia in other diseases classified elsewhere) +F03 (unspecified dementia) +F04 (organic amnesic syndrome, not induced by alcohol and other psychoactive substances) +F05 (delirium, not induced by alcohol and other psychoactive substances) +F06 (other mental disorders due to brain damage and dysfunction and to physical disease) +F07 (personality and behavioural disorders due to brain disease, damage and dysfunction) +F09 (unspecified organic or symptomatic mental disorder) +F10 (mental and behavioural disorders due to use of alcohol) +F11 (mental and behavioural disorders due to use of opioids) +F12 (mental and behavioural disorders due to use of cannabinoids) +F13 (mental and behavioural disorders due to use of sedatives or hypnotics) +F14 (mental and behavioural disorders due to use of cocaine) +F15 (mental and behavioural disorders due to use of other stimulants, including caffeine) +F16 (mental and behavioural disorders due to use of hallucinogens) +F17 (mental and behavioural disorders due to use of tobacco) +F18 (mental and behavioural disorders due to use of volatile solvents) +F19 (mental and behavioural disorders due to multiple drug use and use of other psychoactive substances) +F20 (schizophrenia) +F21 (schizotypal disorder) +F22 (persistent delusional disorders) +F23 (acute and transient psychotic disorders) +F24 (induced delusional disorder) +F25 (schizoaffective disorders) +F28 (other nonorganic psychotic disorders) +F29 (unspecified nonorganic psychosis) +F30 (manic episode) +F31 (bipolar affective disorder) +F32 (depressive episode) +F33 (recurrent depressive disorder) +F34 (persistent mood [affective] disorders) +F38 (other mood [affective] disorders) +F39 (unspecified mood [affective] disorder) +F40 (phobic anxiety disorders) +F41 (other anxiety disorders) +F42 (obsessive-compulsive disorder) +F43 (reaction to severe stress, and adjustment disorders) +F44 (dissociative [conversion] disorders) +F45 (somatoform disorders) +F48 (other neurotic disorders) +F50 (eating disorders) +F51 (nonorganic sleep disorders) +F52 (sexual dysfunction, not caused by organic disorder or disease) +F53 (mental and behavioural disorders associated with the puerperium, not elsewhere classified) +F54 (psychological and behavioural factors associated with disorders or diseases classified elsewhere) +F55 (abuse of non-dependence-producing substances) +F59 (unspecified behavioural syndromes associated with physiological disturbances and physical factors) +F60 (specific personality disorders) +F61 (mixed and other personality disorders) +F62 (enduring personality changes, not attributable to brain damage and disease) +F63 (habit and impulse disorders) +F64 (gender identity disorders) +F65 (disorders of sexual preference) +F66 (psychological and behavioural disorders associated with sexual development and orientation) +F68 (other disorders of adult personality and behaviour) +F69 (unspecified disorder of adult personality and behaviour) +F70 (mild mental retardation) +F71 (moderate mental retardation) +F72 (severe mental retardation) +F78 (other mental retardation) +F79 (unspecified mental retardation) +F80 (specific developmental disorders of speech and language) +F81 (specific developmental disorders of scholastic skills) +F82 (specific developmental disorder of motor function) +F83 (mixed specific developmental disorders) +F84 (pervasive developmental disorders) +F88 (other disorders of psychological development) +F89 (unspecified disorder of psychological development) +F90 (hyperkinetic disorders) +F91 (conduct disorders) +F92 (mixed disorders of conduct and emotions) +F93 (emotional disorders with onset specific to childhood) +F94 (disorders of social functioning with onset specific to childhood and adolescence) +F95 (tic disorders) +F98 (other behavioural and emotional disorders with onset usually occurring in childhood and adolescence) +F99 (mental disorder, not otherwise specified) +G00 (bacterial meningitis, not elsewhere classified) +G01 (meningitis in bacterial diseases classified elsewhere) +G02 (meningitis in other infectious and parasitic diseases classified elsewhere) +G03 (meningitis due to other and unspecified causes) +G04 (encephalitis, myelitis and encephalomyelitis) +G05 (encephalitis, myelitis and encephalomyelitis in diseases classified elsewhere) +G06 (intracranial and intraspinal abscess and granuloma) +G07 (intracranial and intraspinal abscess and granuloma in diseases classified elsewhere) +G08 (intracranial and intraspinal phlebitis and thrombophlebitis) +G09 (sequelae of inflammatory diseases of central nervous system) +G10 (huntington's disease) +G11 (hereditary ataxia) +G12 (spinal muscular atrophy and related syndromes) +G13 (systemic atrophies primarily affecting central nervous system in diseases classified elsewhere) +G14 (postpolio syndrome) +G20 (parkinson's disease) +G21 (secondary parkinsonism) +G22 (parkinsonism in diseases classified elsewhere) +G23 (other degenerative diseases of basal ganglia) +G24 (dystonia) +G25 (other extrapyramidal and movement disorders) +G30 (alzheimer's disease) +G31 (other degenerative diseases of nervous system, not elsewhere classified) +G32 (other degenerative disorders of nervous system in diseases classified elsewhere) +G35 (multiple sclerosis) +G36 (other acute disseminated demyelination) +G37 (other demyelinating diseases of central nervous system) +G40 (epilepsy) +G41 (status epilepticus) +G43 (migraine) +G44 (other headache syndromes) +G45 (transient cerebral ischaemic attacks and related syndromes) +G46 (vascular syndromes of brain in cerebrovascular diseases) +G47 (sleep disorders) +G50 (disorders of trigeminal nerve) +G51 (facial nerve disorders) +G52 (disorders of other cranial nerves) +G53 (cranial nerve disorders in diseases classified elsewhere) +G54 (nerve root and plexus disorders) +G55 (nerve root and plexus compressions in diseases classified elsewhere) +G56 (mononeuropathies of upper limb) +G57 (mononeuropathies of lower limb) +G58 (other mononeuropathies) +G59 (mononeuropathy in diseases classified elsewhere) +G60 (hereditary and idiopathic neuropathy) +G61 (inflammatory polyneuropathy) +G62 (other polyneuropathies) +G63 (polyneuropathy in diseases classified elsewhere) +G64 (other disorders of peripheral nervous system) +G70 (myasthenia gravis and other myoneural disorders) +G71 (primary disorders of muscles) +G72 (other myopathies) +G73 (disorders of myoneural junction and muscle in diseases classified elsewhere) +G80 (infantile cerebral palsy) +G81 (hemiplegia) +G82 (paraplegia and tetraplegia) +G83 (other paralytic syndromes) +G90 (disorders of autonomic nervous system) +G91 (hydrocephalus) +G92 (toxic encephalopathy) +G93 (other disorders of brain) +G94 (other disorders of brain in diseases classified elsewhere) +G95 (other diseases of spinal cord) +G96 (other disorders of central nervous system) +G97 (postprocedural disorders of nervous system, not elsewhere classified) +G98 (other disorders of nervous system, not elsewhere classified) +G99 (other disorders of nervous system in diseases classified elsewhere) +H00 (hordeolum and chalazion) +H01 (other inflammation of eyelid) +H02 (other disorders of eyelid) +H03 (disorders of eyelid in diseases classified elsewhere) +H04 (disorders of lachrymal system) +H05 (disorders of orbit) +H06 (disorders of lachrymal system and orbit in diseases classified elsewhere) +H10 (conjunctivitis) +H11 (other disorders of conjunctiva) +H13 (disorders of conjunctiva in diseases classified elsewhere) +H15 (disorders of sclera) +H16 (keratitis) +H17 (corneal scars and opacities) +H18 (other disorders of cornea) +H19 (disorders of sclera and cornea in diseases classified elsewhere) +H20 (iridocyclitis) +H21 (other disorders of iris and ciliary body) +H22 (disorders of iris and ciliary body in diseases classified elsewhere) +H25 (senile cataract) +H26 (other cataract) +H27 (other disorders of lens) +H28 (cataract and other disorders of lens in diseases classified elsewhere) +H30 (chorioretinal inflammation) +H31 (other disorders of choroid) +H32 (chorioretinal disorders in diseases classified elsewhere) +H33 (retinal detachments and breaks) +H34 (retinal vascular occlusions) +H35 (other retinal disorders) +H36 (retinal disorders in diseases classified elsewhere) +H40 (glaucoma) +H42 (glaucoma in diseases classified elsewhere) +H43 (disorders of vitreous body) +H44 (disorders of globe) +H45 (disorders of vitreous body and globe in diseases classified elsewhere) +H46 (optic neuritis) +H47 (other disorders of optic [2nd] nerve and visual pathways) +H48 (disorders of optic [2nd] nerve and visual pathways in diseases classified elsewhere) +H49 (paralytic strabismus) +H50 (other strabismus) +H51 (other disorders of binocular movement) +H52 (disorders of refraction and accommodation) +H53 (visual disturbances) +H54 (blindness and low vision) +H55 (nystagmus and other irregular eye movements) +H57 (other disorders of eye and adnexa) +H58 (other disorders of eye and adnexa in diseases classified elsewhere) +H59 (postprocedural disorders of eye and adnexa, not elsewhere classified) +H60 (otitis externa) +H61 (other disorders of external ear) +H62 (disorders of external ear in diseases classified elsewhere) +H65 (nonsuppurative otitis media) +H66 (suppurative and unspecified otitis media) +H67 (otitis media in diseases classified elsewhere) +H68 (eustachian salpingitis and obstruction) +H69 (other disorders of eustachian tube) +H70 (mastoiditis and related conditions) +H71 (cholesteatoma of middle ear) +H72 (perforation of tympanic membrane) +H73 (other disorders of tympanic membrane) +H74 (other disorders of middle ear and mastoid) +H75 (other disorders of middle ear and mastoid in diseases classified elsewhere) +H80 (otosclerosis) +H81 (disorders of vestibular function) +H82 (vertiginous syndromes in diseases classified elsewhere) +H83 (other diseases of inner ear) +H90 (conductive and sensorineural hearing loss) +H91 (other hearing loss) +H92 (otalgia and effusion of ear) +H93 (other disorders of ear, not elsewhere classified) +H94 (other disorders of ear in diseases classified elsewhere) +H95 (postprocedural disorders of ear and mastoid process, not elsewhere classified) +I00 (rheumatic fever without mention of heart involvement) +I01 (rheumatic fever with heart involvement) +I02 (rheumatic chorea) +I05 (rheumatic mitral valve diseases) +I06 (rheumatic aortic valve diseases) +I07 (rheumatic tricuspid valve diseases) +I08 (multiple valve diseases) +I09 (other rheumatic heart diseases) +I10 (essential (primary) hypertension) +I11 (hypertensive heart disease) +I12 (hypertensive renal disease) +I13 (hypertensive heart and renal disease) +I15 (secondary hypertension) +I20 (angina pectoris) +I21 (acute myocardial infarction) +I22 (subsequent myocardial infarction) +I23 (certain current complications following acute myocardial infarction) +I24 (other acute ischaemic heart diseases) +I25 (chronic ischaemic heart disease) +I26 (pulmonary embolism) +I27 (other pulmonary heart diseases) +I28 (other diseases of pulmonary vessels) +I30 (acute pericarditis) +I31 (other diseases of pericardium) +I32 (pericarditis in diseases classified elsewhere) +I33 (acute and subacute endocarditis) +I34 (nonrheumatic mitral valve disorders) +I35 (nonrheumatic aortic valve disorders) +I36 (nonrheumatic tricuspid valve disorders) +I37 (pulmonary valve disorders) +I38 (endocarditis, valve unspecified) +I39 (endocarditis and heart valve disorders in diseases classified elsewhere) +I40 (acute myocarditis) +I41 (myocarditis in diseases classified elsewhere) +I42 (cardiomyopathy) +I43 (cardiomyopathy in diseases classified elsewhere) +I44 (atrioventricular and left bundle-branch block) +I45 (other conduction disorders) +I46 (cardiac arrest) +I47 (paroxysmal tachycardia) +I48 (atrial fibrillation and flutter) +I49 (other cardiac arrhythmias) +I50 (heart failure) +I51 (complications and ill-defined descriptions of heart disease) +I52 (other heart disorders in diseases classified elsewhere) +I60 (subarachnoid haemorrhage) +I61 (intracerebral haemorrhage) +I62 (other nontraumatic intracranial haemorrhage) +I63 (cerebral infarction) +I64 (stroke, not specified as haemorrhage or infarction) +I65 (occlusion and stenosis of precerebral arteries, not resulting in cerebral infarction) +I66 (occlusion and stenosis of cerebral arteries, not resulting in cerebral infarction) +I67 (other cerebrovascular diseases) +I68 (cerebrovascular disorders in diseases classified elsewhere) +I69 (sequelae of cerebrovascular disease) +I70 (atherosclerosis) +I71 (aortic aneurysm and dissection) +I72 (other aneurysm) +I73 (other peripheral vascular diseases) +I74 (arterial embolism and thrombosis) +I77 (other disorders of arteries and arterioles) +I78 (diseases of capillaries) +I79 (disorders of arteries, arterioles and capillaries in diseases classified elsewhere) +I80 (phlebitis and thrombophlebitis) +I81 (portal vein thrombosis) +I82 (other venous embolism and thrombosis) +I83 (varicose veins of lower extremities) +I84 (haemorrhoids) +I85 (oesophageal varices) +I86 (varicose veins of other sites) +I87 (other disorders of veins) +I88 (nonspecific lymphadenitis) +I89 (other non-infective disorders of lymphatic vessels and lymph nodes) +I95 (hypotension) +I97 (postprocedural disorders of circulatory system, not elsewhere classified) +I98 (other disorders of circulatory system in diseases classified elsewhere) +I99 (other and unspecified disorders of circulatory system) +J00 (acute nasopharyngitis [common cold]) +J01 (acute sinusitis) +J02 (acute pharyngitis) +J03 (acute tonsillitis) +J04 (acute laryngitis and tracheitis) +J05 (acute obstructive laryngitis [croup] and epiglottitis) +J06 (acute upper respiratory infections of multiple and unspecified sites) +J09 (influenza due to certain identified influenza virus) +J10 (influenza due to identified influenza virus) +J11 (influenza, virus not identified) +J12 (viral pneumonia, not elsewhere classified) +J13 (pneumonia due to streptococcus pneumoniae) +J14 (pneumonia due to haemophilus influenzae) +J15 (bacterial pneumonia, not elsewhere classified) +J16 (pneumonia due to other infectious organisms, not elsewhere classified) +J17 (pneumonia in diseases classified elsewhere) +J18 (pneumonia, organism unspecified) +J20 (acute bronchitis) +J21 (acute bronchiolitis) +J22 (unspecified acute lower respiratory infection) +J30 (vasomotor and allergic rhinitis) +J31 (chronic rhinitis, nasopharyngitis and pharyngitis) +J32 (chronic sinusitis) +J33 (nasal polyp) +J34 (other disorders of nose and nasal sinuses) +J35 (chronic diseases of tonsils and adenoids) +J36 (peritonsillar abscess) +J37 (chronic laryngitis and laryngotracheitis) +J38 (diseases of vocal cords and larynx, not elsewhere classified) +J39 (other diseases of upper respiratory tract) +J40 (bronchitis, not specified as acute or chronic) +J41 (simple and mucopurulent chronic bronchitis) +J42 (unspecified chronic bronchitis) +J43 (emphysema) +J44 (other chronic obstructive pulmonary disease) +J45 (asthma) +J46 (status asthmaticus) +J47 (bronchiectasis) +J60 (coalworker's pneumoconiosis) +J61 (pneumoconiosis due to asbestos and other mineral fibres) +J62 (pneumoconiosis due to dust containing silica) +J63 (pneumoconiosis due to other inorganic dusts) +J64 (unspecified pneumoconiosis) +J66 (airway disease due to specific organic dust) +J67 (hypersensitivity pneumonitis due to organic dust) +J68 (respiratory conditions due to inhalation of chemicals, gases, fumes and vapours) +J69 (pneumonitis due to solids and liquids) +J70 (respiratory conditions due to other external agents) +J80 (adult respiratory distress syndrome) +J81 (pulmonary oedema) +J82 (pulmonary eosinophilia, not elsewhere classified) +J84 (other interstitial pulmonary diseases) +J85 (abscess of lung and mediastinum) +J86 (pyothorax) +J90 (pleural effusion, not elsewhere classified) +J91 (pleural effusion in conditions classified elsewhere) +J92 (pleural plaque) +J93 (pneumothorax) +J94 (other pleural conditions) +J95 (postprocedural respiratory disorders, not elsewhere classified) +J96 (respiratory failure, not elsewhere classified) +J98 (other respiratory disorders) +J99 (respiratory disorders in diseases classified elsewhere) +K00 (disorders of tooth development and eruption) +K01 (embedded and impacted teeth) +K02 (dental caries) +K03 (other diseases of hard tissues of teeth) +K04 (diseases of pulp and periapical tissues) +K05 (gingivitis and periodontal diseases) +K06 (other disorders of gingiva and edentulous alveolar ridge) +K07 (dentofacial anomalies [including malocclusion]) +K08 (other disorders of teeth and supporting structures) +K09 (cysts of oral region, not elsewhere classified) +K10 (other diseases of jaws) +K11 (diseases of salivary glands) +K12 (stomatitis and related lesions) +K13 (other diseases of lip and oral mucosa) +K14 (diseases of tongue) +K20 (oesophagitis) +K21 (gastro-oesophageal reflux disease) +K22 (other diseases of oesophagus) +K23 (disorders of oesophagus in diseases classified elsewhere) +K25 (gastric ulcer) +K26 (duodenal ulcer) +K27 (peptic ulcer, site unspecified) +K28 (gastrojejunal ulcer) +K29 (gastritis and duodenitis) +K30 (dyspepsia) +K31 (other diseases of stomach and duodenum) +K35 (acute appendicitis) +K36 (other appendicitis) +K37 (unspecified appendicitis) +K38 (other diseases of appendix) +K40 (inguinal hernia) +K41 (femoral hernia) +K42 (umbilical hernia) +K43 (ventral hernia) +K44 (diaphragmatic hernia) +K45 (other abdominal hernia) +K46 (unspecified abdominal hernia) +K50 (crohn's disease [regional enteritis]) +K51 (ulcerative colitis) +K52 (other non-infective gastro-enteritis and colitis) +K55 (vascular disorders of intestine) +K56 (paralytic ileus and intestinal obstruction without hernia) +K57 (diverticular disease of intestine) +K58 (irritable bowel syndrome) +K59 (other functional intestinal disorders) +K60 (fissure and fistula of anal and rectal regions) +K61 (abscess of anal and rectal regions) +K62 (other diseases of anus and rectum) +K63 (other diseases of intestine) +K64 (haemorrhoids and perianal venous thrombosis) +K65 (peritonitis) +K66 (other disorders of peritoneum) +K67 (disorders of peritoneum in infectious diseases classified elsewhere) +K70 (alcoholic liver disease) +K71 (toxic liver disease) +K72 (hepatic failure, not elsewhere classified) +K73 (chronic hepatitis, not elsewhere classified) +K74 (fibrosis and cirrhosis of liver) +K75 (other inflammatory liver diseases) +K76 (other diseases of liver) +K77 (liver disorders in diseases classified elsewhere) +K80 (cholelithiasis) +K81 (cholecystitis) +K82 (other diseases of gallbladder) +K83 (other diseases of biliary tract) +K85 (acute pancreatitis) +K86 (other diseases of pancreas) +K87 (disorders of gallbladder, biliary tract and pancreas in diseases classified elsewhere) +K90 (intestinal malabsorption) +K91 (postprocedural disorders of digestive system, not elsewhere classified) +K92 (other diseases of digestive system) +K93 (disorders of other digestive organs in diseases classified elsewhere) +L00 (staphylococcal scalded skin syndrome) +L01 (impetigo) +L02 (cutaneous abscess, furuncle and carbuncle) +L03 (cellulitis) +L04 (acute lymphadenitis) +L05 (pilonidal cyst) +L08 (other local infections of skin and subcutaneous tissue) +L10 (pemphigus) +L11 (other acantholytic disorders) +L12 (pemphigoid) +L13 (other bullous disorders) +L14 (bullous disorders in diseases classified elsewhere) +L20 (atopic dermatitis) +L21 (seborrhoeic dermatitis) +L22 (diaper [napkin] dermatitis) +L23 (allergic contact dermatitis) +L24 (irritant contact dermatitis) +L25 (unspecified contact dermatitis) +L26 (exfoliative dermatitis) +L27 (dermatitis due to substances taken internally) +L28 (lichen simplex chronicus and prurigo) +L29 (pruritus) +L30 (other dermatitis) +L40 (psoriasis) +L41 (parapsoriasis) +L42 (pityriasis rosea) +L43 (lichen planus) +L44 (other papulosquamous disorders) +L50 (urticaria) +L51 (erythema multiforme) +L52 (erythema nodosum) +L53 (other erythematous conditions) +L54 (erythema in diseases classified elsewhere) +L55 (sunburn) +L56 (other acute skin changes due to ultraviolet radiation) +L57 (skin changes due to chronic exposure to nonionising radiation) +L58 (radiodermatitis) +L59 (other disorders of skin and subcutaneous tissue related to radiation) +L60 (nail disorders) +L62 (nail disorders in diseases classified elsewhere) +L63 (alopecia areata) +L64 (androgenic alopecia) +L65 (other nonscarring hair loss) +L66 (cicatricial alopecia [scarring hair loss]) +L67 (hair colour and hair shaft abnormalities) +L68 (hypertrichosis) +L70 (acne) +L71 (rosacea) +L72 (follicular cysts of skin and subcutaneous tissue) +L73 (other follicular disorders) +L74 (eccrine sweat disorders) +L75 (apocrine sweat disorders) +L80 (vitiligo) +L81 (other disorders of pigmentation) +L82 (seborrhoeic keratosis) +L83 (acanthosis nigricans) +L84 (corns and callosities) +L85 (other epidermal thickening) +L86 (keratoderma in diseases classified elsewhere) +L87 (transepidermal elimination disorders) +L88 (pyoderma gangrenosum) +L89 (decubitus ulcer) +L90 (atrophic disorders of skin) +L91 (hypertrophic disorders of skin) +L92 (granulomatous disorders of skin and subcutaneous tissue) +L93 (lupus erythematosus) +L94 (other localised connective tissue disorders) +L95 (vasculitis limited to skin, not elsewhere classified) +L97 (ulcer of lower limb, not elsewhere classified) +L98 (other disorders of skin and subcutaneous tissue, not elsewhere classified) +L99 (other disorders of skin and subcutaneous tissue in diseases classified elsewhere) +M00 (pyogenic arthritis) +M01 (direct infections of joint in infectious and parasitic diseases classified elsewhere) +M02 (reactive arthropathies) +M03 (postinfective and reactive arthropathies in diseases classified elsewhere) +M05 (seropositive rheumatoid arthritis) +M06 (other rheumatoid arthritis) +M07 (psoriatic and enteropathic arthropathies) +M08 (juvenile arthritis) +M09 (juvenile arthritis in diseases classified elsewhere) +M10 (gout) +M11 (other crystal arthropathies) +M12 (other specific arthropathies) +M13 (other arthritis) +M14 (arthropathies in other diseases classified elsewhere) +M15 (polyarthrosis) +M16 (coxarthrosis [arthrosis of hip]) +M17 (gonarthrosis [arthrosis of knee]) +M18 (arthrosis of first carpometacarpal joint) +M19 (other arthrosis) +M20 (acquired deformities of fingers and toes) +M21 (other acquired deformities of limbs) +M22 (disorders of patella) +M23 (internal derangement of knee) +M24 (other specific joint derangements) +M25 (other joint disorders, not elsewhere classified) +M30 (polyarteritis nodosa and related conditions) +M31 (other necrotising vasculopathies) +M32 (systemic lupus erythematosus) +M33 (dermatopolymyositis) +M34 (systemic sclerosis) +M35 (other systemic involvement of connective tissue) +M36 (systemic disorders of connective tissue in diseases classified elsewhere) +M40 (kyphosis and lordosis) +M41 (scoliosis) +M42 (spinal osteochondrosis) +M43 (other deforming dorsopathies) +M45 (ankylosing spondylitis) +M46 (other inflammatory spondylopathies) +M47 (spondylosis) +M48 (other spondylopathies) +M49 (spondylopathies in diseases classified elsewhere) +M50 (cervical disk disorders) +M51 (other intervertebral disk disorders) +M53 (other dorsopathies, not elsewhere classified) +M54 (dorsalgia) +M60 (myositis) +M61 (calcification and ossification of muscle) +M62 (other disorders of muscle) +M63 (disorders of muscle in diseases classified elsewhere) +M65 (synovitis and tenosynovitis) +M66 (spontaneous rupture of synovium and tendon) +M67 (other disorders of synovium and tendon) +M68 (disorders of synovium and tendon in diseases classified elsewhere) +M70 (soft tissue disorders related to use, overuse and pressure) +M71 (other bursopathies) +M72 (fibroblastic disorders) +M73 (soft tissue disorders in diseases classified elsewhere) +M75 (shoulder lesions) +M76 (enthesopathies of lower limb, excluding foot) +M77 (other enthesopathies) +M79 (other soft tissue disorders, not elsewhere classified) +M80 (osteoporosis with pathological fracture) +M81 (osteoporosis without pathological fracture) +M82 (osteoporosis in diseases classified elsewhere) +M83 (adult osteomalacia) +M84 (disorders of continuity of bone) +M85 (other disorders of bone density and structure) +M86 (osteomyelitis) +M87 (osteonecrosis) +M88 (paget's disease of bone [osteitis deformans]) +M89 (other disorders of bone) +M90 (osteopathies in diseases classified elsewhere) +M91 (juvenile osteochondrosis of hip and pelvis) +M92 (other juvenile osteochondrosis) +M93 (other osteochondropathies) +M94 (other disorders of cartilage) +M95 (other acquired deformities of musculoskeletal system and connective tissue) +M96 (postprocedural musculoskeletal disorders, not elsewhere classified) +M99 (biomechanical lesions, not elsewhere classified) +N00 (acute nephritic syndrome) +N01 (rapidly progressive nephritic syndrome) +N02 (recurrent and persistent haematuria) +N03 (chronic nephritic syndrome) +N04 (nephrotic syndrome) +N05 (unspecified nephritic syndrome) +N06 (isolated proteinuria with specified morphological lesion) +N07 (hereditary nephropathy, not elsewhere classified) +N08 (glomerular disorders in diseases classified elsewhere) +N10 (acute tubulo-interstitial nephritis) +N11 (chronic tubulo-interstitial nephritis) +N12 (tubulo-interstitial nephritis, not specified as acute or chronic) +N13 (obstructive and reflux uropathy) +N14 (drug- and heavy-metal-induced tubulo-interstitial and tubular conditions) +N15 (other renal tubulo-interstitial diseases) +N16 (renal tubulo-interstitial disorders in diseases classified elsewhere) +N17 (acute renal failure) +N18 (chronic renal failure) +N19 (unspecified renal failure) +N20 (calculus of kidney and ureter) +N21 (calculus of lower urinary tract) +N22 (calculus of urinary tract in diseases classified elsewhere) +N23 (unspecified renal colic) +N25 (disorders resulting from impaired renal tubular function) +N26 (unspecified contracted kidney) +N27 (small kidney of unknown cause) +N28 (other disorders of kidney and ureter, not elsewhere classified) +N29 (other disorders of kidney and ureter in diseases classified elsewhere) +N30 (cystitis) +N31 (neuromuscular dysfunction of bladder, not elsewhere classified) +N32 (other disorders of bladder) +N33 (bladder disorders in diseases classified elsewhere) +N34 (urethritis and urethral syndrome) +N35 (urethral stricture) +N36 (other disorders of urethra) +N37 (urethral disorders in diseases classified elsewhere) +N39 (other disorders of urinary system) +N40 (hyperplasia of prostate) +N41 (inflammatory diseases of prostate) +N42 (other disorders of prostate) +N43 (hydrocele and spermatocele) +N44 (torsion of testis) +N45 (orchitis and epididymitis) +N46 (male infertility) +N47 (redundant prepuce, phimosis and paraphimosis) +N48 (other disorders of penis) +N49 (inflammatory disorders of male genital organs, not elsewhere classified) +N50 (other disorders of male genital organs) +N51 (disorders of male genital organs in diseases classified elsewhere) +N60 (benign mammary dysplasia) +N61 (inflammatory disorders of breast) +N62 (hypertrophy of breast) +N63 (unspecified lump in breast) +N64 (other disorders of breast) +N70 (salpingitis and oophoritis) +N71 (inflammatory disease of uterus, except cervix) +N72 (inflammatory disease of cervix uteri) +N73 (other female pelvic inflammatory diseases) +N74 (female pelvic inflammatory disorders in diseases classified elsewhere) +N75 (diseases of bartholin's gland) +N76 (other inflammation of vagina and vulva) +N77 (vulvovaginal ulceration and inflammation in diseases classified elsewhere) +N80 (endometriosis) +N81 (female genital prolapse) +N82 (fistulae involving female genital tract) +N83 (noninflammatory disorders of ovary, fallopian tube and broad ligament) +N84 (polyp of female genital tract) +N85 (other noninflammatory disorders of uterus, except cervix) +N86 (erosion and ectropion of cervix uteri) +N87 (dysplasia of cervix uteri) +N88 (other noninflammatory disorders of cervix uteri) +N89 (other noninflammatory disorders of vagina) +N90 (other noninflammatory disorders of vulva and perineum) +N91 (absent, scanty and rare menstruation) +N92 (excessive, frequent and irregular menstruation) +N93 (other abnormal uterine and vaginal bleeding) +N94 (pain and other conditions associated with female genital organs and menstrual cycle) +N95 (menopausal and other perimenopausal disorders) +N96 (habitual aborter) +N97 (female infertility) +N98 (complications associated with artificial fertilisation) +N99 (postprocedural disorders of genito-urinary system, not elsewhere classified) +O00 (ectopic pregnancy) +O01 (hydatidiform mole) +O02 (other abnormal products of conception) +O03 (spontaneous abortion) +O04 (medical abortion) +O05 (other abortion) +O06 (unspecified abortion) +O07 (failed attempted abortion) +O08 (complications following abortion and ectopic and molar pregnancy) +O10 (pre-existing hypertension complicating pregnancy, childbirth and the puerperium) +O11 (pre-existing hypertensive disorder with superimposed proteinuria) +O12 (gestational [pregnancy-induced] oedema and proteinuria without hypertension) +O13 (gestational [pregnancy-induced] hypertension without significant proteinuria) +O14 (gestational [pregnancy-induced] hypertension with significant proteinuria) +O15 (eclampsia) +O16 (unspecified maternal hypertension) +O20 (haemorrhage in early pregnancy) +O21 (excessive vomiting in pregnancy) +O22 (venous complications in pregnancy) +O23 (infections of genito-urinary tract in pregnancy) +O24 (diabetes mellitus in pregnancy) +O25 (malnutrition in pregnancy) +O26 (maternal care for other conditions predominantly related to pregnancy) +O28 (abnormal findings on antenatal screening of mother) +O29 (complications of anaesthesia during pregnancy) +O30 (multiple gestation) +O31 (complications specific to multiple gestation) +O32 (maternal care for known or suspected malpresentation of foetus) +O33 (maternal care for known or suspected disproportion) +O34 (maternal care for known or suspected abnormality of pelvic organs) +O35 (maternal care for known or suspected foetal abnormality and damage) +O36 (maternal care for other known or suspected foetal problems) +O40 (polyhydramnios) +O41 (other disorders of amniotic fluid and membranes) +O42 (premature rupture of membranes) +O43 (placental disorders) +O44 (placenta praevia) +O45 (premature separation of placenta [abruptio placentae]) +O46 (antepartum haemorrhage, not elsewhere classified) +O47 (false labour) +O48 (prolonged pregnancy) +O60 (preterm delivery) +O61 (failed induction of labour) +O62 (abnormalities of forces of labour) +O63 (long labour) +O64 (obstructed labour due to malposition and malpresentation of foetus) +O65 (obstructed labour due to maternal pelvic abnormality) +O66 (other obstructed labour) +O67 (labour and delivery complicated by intrapartum haemorrhage, not elsewhere classified) +O68 (labour and delivery complicated by foetal stress [distress]) +O69 (labour and delivery complicated by umbilical cord complications) +O70 (perineal laceration during delivery) +O71 (other obstetric trauma) +O72 (postpartum haemorrhage) +O73 (retained placenta and membranes, without haemorrhage) +O74 (complications of anaesthesia during labour and delivery) +O75 (other complications of labour and delivery, not elsewhere classified) +O80 (single spontaneous delivery) +O81 (single delivery by forceps and vacuum extractor) +O82 (single delivery by caesarean section) +O83 (other assisted single delivery) +O84 (multiple delivery) +O85 (puerperal sepsis) +O86 (other puerperal infections) +O87 (venous complications in the puerperium) +O88 (obstetric embolism) +O89 (complications of anaesthesia during the puerperium) +O90 (complications of the puerperium, not elsewhere classified) +O91 (infections of breast associated with childbirth) +O92 (other disorders of breast and lactation associated with childbirth) +O94 (sequelae of complication of pregnancy, childbirth and the puerperium) +O96 (death from any obstetric cause occurring more than 42 days but less than one year after delivery) +O98 (maternal infectious and parasitic diseases classifiable elsewhere but complicating pregnancy, childbirth and the puerperium) +O99 (other maternal diseases classifiable elsewhere but complicating pregnancy, childbirth and the puerperium) +P00 (foetus and newborn affected by maternal conditions that may be unrelated to present pregnancy) +P02 (foetus and newborn affected by complications of placenta, cord and membranes) +P03 (foetus and newborn affected by other complications of labour and delivery) +P04 (foetus and newborn affected by noxious influences transmitted via placenta or breast milk) +P05 (slow foetal growth and foetal malnutrition) +P07 (disorders related to short gestation and low birth weight, not elsewhere classified) +P08 (disorders related to long gestation and high birth weight) +P10 (intracranial laceration and haemorrhage due to birth injury) +P11 (other birth injuries to central nervous system) +P12 (birth injury to scalp) +P13 (birth injury to skeleton) +P14 (birth injury to peripheral nervous system) +P15 (other birth injuries) +P20 (intra-uterine hypoxia) +P21 (birth asphyxia) +P22 (respiratory distress of newborn) +P23 (congenital pneumonia) +P24 (neonatal aspiration syndromes) +P25 (interstitial emphysema and related conditions originating in the perinatal period) +P26 (pulmonary haemorrhage originating in the perinatal period) +P27 (chronic respiratory disease originating in the perinatal period) +P28 (other respiratory conditions originating in the perinatal period) +P29 (cardiovascular disorders originating in the perinatal period) +P35 (congenital viral diseases) +P36 (bacterial sepsis of newborn) +P37 (other congenital infectious and parasitic diseases) +P38 (omphalitis of newborn with or without mild haemorrhage) +P39 (other infections specific to the perinatal period) +P50 (foetal blood loss) +P51 (umbilical haemorrhage of newborn) +P52 (intracranial nontraumatic haemorrhage of foetus and newborn) +P53 (haemorrhagic disease of foetus and newborn) +P54 (other neonatal haemorrhages) +P55 (haemolytic disease of foetus and newborn) +P58 (neonatal jaundice due to other excessive haemolysis) +P59 (neonatal jaundice from other and unspecified causes) +P61 (other perinatal haematological disorders) +P70 (transitory disorders of carbohydrate metabolism specific to foetus and newborn) +P71 (transitory neonatal disorders of calcium and magnesium metabolism) +P78 (other perinatal digestive system disorders) +P83 (other conditions of integument specific to foetus and newborn) +P91 (other disturbances of cerebral status of newborn) +P92 (feeding problems of newborn) +P94 (disorders of muscle tone of newborn) +P95 (foetal death of unspecified cause) +P96 (other conditions originating in the perinatal period) +Q00 (anencephaly and similar malformations) +Q01 (encephalocele) +Q02 (microcephaly) +Q03 (congenital hydrocephalus) +Q04 (other congenital malformations of brain) +Q05 (spina bifida) +Q06 (other congenital malformations of spinal cord) +Q07 (other congenital malformations of nervous system) +Q10 (congenital malformations of eyelid, lachrymal apparatus and orbit) +Q11 (anophthalmos, microphthalmos and macrophthalmos) +Q12 (congenital lens malformations) +Q13 (congenital malformations of anterior segment of eye) +Q14 (congenital malformations of posterior segment of eye) +Q15 (other congenital malformations of eye) +Q16 (congenital malformations of ear causing impairment of hearing) +Q17 (other congenital malformations of ear) +Q18 (other congenital malformations of face and neck) +Q20 (congenital malformations of cardiac chambers and connexions) +Q21 (congenital malformations of cardiac septa) +Q22 (congenital malformations of pulmonary and tricuspid valves) +Q23 (congenital malformations of aortic and mitral valves) +Q24 (other congenital malformations of heart) +Q25 (congenital malformations of great arteries) +Q26 (congenital malformations of great veins) +Q27 (other congenital malformations of peripheral vascular system) +Q28 (other congenital malformations of circulatory system) +Q30 (congenital malformations of nose) +Q31 (congenital malformations of larynx) +Q32 (congenital malformations of trachea and bronchus) +Q33 (congenital malformations of lung) +Q34 (other congenital malformations of respiratory system) +Q35 (cleft palate) +Q36 (cleft lip) +Q37 (cleft palate with cleft lip) +Q38 (other congenital malformations of tongue, mouth and pharynx) +Q39 (congenital malformations of oesophagus) +Q40 (other congenital malformations of upper alimentary tract) +Q41 (congenital absence, atresia and stenosis of small intestine) +Q42 (congenital absence, atresia and stenosis of large intestine) +Q43 (other congenital malformations of intestine) +Q44 (congenital malformations of gallbladder, bile ducts and liver) +Q45 (other congenital malformations of digestive system) +Q50 (congenital malformations of ovaries, fallopian tubes and broad ligaments) +Q51 (congenital malformations of uterus and cervix) +Q52 (other congenital malformations of female genitalia) +Q53 (undescended testicle) +Q54 (hypospadias) +Q55 (other congenital malformations of male genital organs) +Q56 (indeterminate sex and pseudohermaphroditism) +Q60 (renal agenesis and other reduction defects of kidney) +Q61 (cystic kidney disease) +Q62 (congenital obstructive defects of renal pelvis and congenital malformations of ureter) +Q63 (other congenital malformations of kidney) +Q64 (other congenital malformations of urinary system) +Q65 (congenital deformities of hip) +Q66 (congenital deformities of feet) +Q67 (congenital musculoskeletal deformities of head, face, spine and chest) +Q68 (other congenital musculoskeletal deformities) +Q69 (polydactyly) +Q70 (syndactyly) +Q71 (reduction defects of upper limb) +Q72 (reduction defects of lower limb) +Q73 (reduction defects of unspecified limb) +Q74 (other congenital malformations of limb(s)) +Q75 (other congenital malformations of skull and face bones) +Q76 (congenital malformations of spine and bony thorax) +Q77 (osteochondrodysplasia with defects of growth of tubular bones and spine) +Q78 (other osteochondrodysplasias) +Q79 (congenital malformations of musculoskeletal system, not elsewhere classified) +Q80 (congenital ichthyosis) +Q81 (epidermolysis bullosa) +Q82 (other congenital malformations of skin) +Q83 (congenital malformations of breast) +Q84 (other congenital malformations of integument) +Q85 (phakomatoses, not elsewhere classified) +Q86 (congenital malformation syndromes due to known exogenous causes, not elsewhere classified) +Q87 (other specified congenital malformation syndromes affecting multiple systems) +Q89 (other congenital malformations, not elsewhere classified) +Q90 (down's syndrome) +Q91 (edwards' syndrome and patau's syndrome) +Q92 (other trisomies and partial trisomies of the autosomes, not elsewhere classified) +Q93 (monosomies and deletions from the autosomes, not elsewhere classified) +Q95 (balanced rearrangements and structural markers, not elsewhere classified) +Q96 (turner's syndrome) +Q97 (other sex chromosome abnormalities, female phenotype, not elsewhere classified) +Q98 (other sex chromosome abnormalities, male phenotype, not elsewhere classified) +Q99 (other chromosome abnormalities, not elsewhere classified) +CXX Unknown Cancer +C00 Malignant neoplasm of lip +C01 Malignant neoplasm of base of tongue +C02 Malignant neoplasm of other and unspecified parts of tongue +C03 Malignant neoplasm of gum +C04 Malignant neoplasm of floor of mouth +C05 Malignant neoplasm of palate +C06 Malignant neoplasm of other and unspecified parts of mouth +C07 Malignant neoplasm of parotid gland +C08 Malignant neoplasm of other and unspecified major salivary glands +C09 Malignant neoplasm of tonsil +C10 Malignant neoplasm of oropharynx +C11 Malignant neoplasm of nasopharynx +C12 Malignant neoplasm of pyriform sinus +C13 Malignant neoplasm of hypopharynx +C14 Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx +C15 Malignant neoplasm of oesophagus +C16 Malignant neoplasm of stomach +C17 Malignant neoplasm of small intestine +C18 Malignant neoplasm of colon +C19 Malignant neoplasm of rectosigmoid junction +C20 Malignant neoplasm of rectum +C21 Malignant neoplasm of anus and anal canal +C22 Malignant neoplasm of liver and intrahepatic bile ducts +C23 Malignant neoplasm of gallbladder +C24 Malignant neoplasm of other and unspecified parts of biliary tract +C25 Malignant neoplasm of pancreas +C26 Malignant neoplasm of other and ill-defined digestive organs +C30 Malignant neoplasm of nasal cavity and middle ear +C31 Malignant neoplasm of accessory sinuses +C32 Malignant neoplasm of larynx +C33 Malignant neoplasm of trachea +C34 Malignant neoplasm of bronchus and lung +C37 Malignant neoplasm of thymus +C38 Malignant neoplasm of heart, mediastinum and pleura +C39 Malignant neoplasm of other and ill-defined sites in the respiratory system and intrathoracic organs +C40 Malignant neoplasm of bone and articular cartilage of limbs +C41 Malignant neoplasm of bone and articular cartilage of other and unspecified sites +C42 hematopoietic and reticuloendothelial systems (ICD-O-3 specific) +C43 Malignant melanoma of skin +C44 Other malignant neoplasms of skin +C45 Mesothelioma +C46 Kaposi's sarcoma +C47 Malignant neoplasm of peripheral nerves and autonomic nervous system +C48 Malignant neoplasm of retroperitoneum and peritoneum +C49 Malignant neoplasm of other connective and soft tissue +C50 Malignant neoplasm of breast +C51 Malignant neoplasm of vulva +C52 Malignant neoplasm of vagina +C53 Malignant neoplasm of cervix uteri +C54 Malignant neoplasm of corpus uteri +C55 Malignant neoplasm of uterus, part unspecified +C56 Malignant neoplasm of ovary +C57 Malignant neoplasm of other and unspecified female genital organs +C58 Malignant neoplasm of placenta +C60 Malignant neoplasm of penis +C61 Malignant neoplasm of prostate +C62 Malignant neoplasm of testis +C63 Malignant neoplasm of other and unspecified male genital organs +C64 Malignant neoplasm of kidney, except renal pelvis +C65 Malignant neoplasm of renal pelvis +C66 Malignant neoplasm of ureter +C67 Malignant neoplasm of bladder +C68 Malignant neoplasm of other and unspecified urinary organs +C69 Malignant neoplasm of eye and adnexa +C70 Malignant neoplasm of meninges +C71 Malignant neoplasm of brain +C72 Malignant neoplasm of spinal cord, cranial nerves and other parts of central nervous system +C73 Malignant neoplasm of thyroid gland +C74 Malignant neoplasm of adrenal gland +C75 Malignant neoplasm of other endocrine glands and related structures +C76 Malignant neoplasm of other and ill-defined sites +C77 Secondary and unspecified malignant neoplasm of lymph nodes +C78 Secondary malignant neoplasm of respiratory and digestive organs +C79 Secondary malignant neoplasm of other sites +C80 Malignant neoplasm without specification of site +C81 Hodgkin's disease +C82 Follicular [nodular] non-Hodgkin's lymphoma +C83 Diffuse non-Hodgkin's lymphoma +C84 Peripheral and cutaneous T-cell lymphomas +C85 Other and unspecified types of non-Hodgkin's lymphoma +C86 Other specified types of T/NK-cell lymphoma +C88 Malignant immunoproliferative diseases +C90 Multiple myeloma and malignant plasma cell neoplasms +C91 Lymphoid leukaemia +C92 Myeloid leukaemia +C93 Monocytic leukaemia +C94 Other leukaemias of specified cell type +C95 Leukaemia of unspecified cell type +C96 Other and unspecified malignant neoplasms of lymphoid, haematopoietic and related tissue +C97 Malignant neoplasms of independent (primary) multiple sites +D00 Carcinoma in situ of oral cavity, oesophagus and stomach +D01 Carcinoma in situ of other and unspecified digestive organs +D02 Carcinoma in situ of middle ear and respiratory system +D03 Melanoma in situ +D04 Carcinoma in situ of skin +D05 Carcinoma in situ of breast +D06 Carcinoma in situ of cervix uteri +D07 Carcinoma in situ of other and unspecified genital organs +D09 Carcinoma in situ of other and unspecified sites +D10 Benign neoplasm of mouth and pharynx +D11 Benign neoplasm of major salivary glands +D12 Benign neoplasm of colon, rectum, anus and anal canal +D13 Benign neoplasm of other and ill-defined parts of digestive system +D15 Benign neoplasm of other and unspecified intrathoracic organs +D16 Benign neoplasm of bone and articular cartilage +D18 Haemangioma and lymphangioma, any site +D27 Benign neoplasm of ovary +D30 Benign neoplasm of urinary organs +D32 Benign neoplasm of meninges +D33 Benign neoplasm of brain and other parts of central nervous system +D34 Benign neoplasm of thyroid gland +D35 Benign neoplasm of other and unspecified endocrine glands +D36 Benign neoplasm of other and unspecified sites +D37 Neoplasm of uncertain or unknown behaviour of oral cavity and digestive organs +D38 Neoplasm of uncertain or unknown behaviour of middle ear and respiratory and intrathoracic organs +D39 Neoplasm of uncertain or unknown behaviour of female genital organs +D40 Neoplasm of uncertain or unknown behaviour of male genital organs +D41 Neoplasm of uncertain or unknown behaviour of urinary organs +D42 Neoplasm of uncertain or unknown behaviour of meninges +D43 Neoplasm of uncertain or unknown behaviour of brain and central nervous system +D44 Neoplasm of uncertain or unknown behaviour of endocrine glands +D45 Polycythaemia vera +D46 Myelodysplastic syndromes +D47 Other neoplasms of uncertain or unknown behaviour of lymphoid, haematopoietic and related tissue +D48 Neoplasm of uncertain or unknown behaviour of other and unspecified sites +O01 Hydatidiform mole38 +Death diff --git a/delphi_fork/prepare_data.py b/delphi_fork/prepare_data.py new file mode 100644 index 0000000..5f47fd4 --- /dev/null +++ b/delphi_fork/prepare_data.py @@ -0,0 +1,216 @@ +import pandas as pd # Pandas for data manipulation +import tqdm # Progress bar for chunk processing +import numpy as np # Numerical operations + +train_frac = 0.7 # Fraction of participants for training split +val_frac = 0.15 # Fraction of participants for validation split +test_frac = 0.15 # Fraction of participants for test split + +# CSV mapping field IDs to human-readable names +field_map_file = "../field_ids_enriched.csv" +field_dict = {} # Map original field ID -> new column name +with open(field_map_file, "r", encoding="utf-8") as f: # Open the field mapping file + next(f) # skip header line + for line in f: # Iterate through lines + parts = line.strip().split(",") # Split by CSV commas + if len(parts) >= 3: # Ensure we have at least id and name columns (fix: was >=2) + # Original field identifier (e.g., "34-0.0") + field_id = parts[0] + field_name = parts[2] # Human-readable column name + field_dict[field_id] = field_name # Record the mapping + # Track as a potential tabular feature + + +# TSV mapping field IDs to ICD10-related date columns +field_to_icd_map = "../icd10_codes_mod.tsv" +# Date-like variables to be converted to offsets +date_vars = [] +with open(field_to_icd_map, "r", encoding="utf-8") as f: # Open ICD10 mapping + for line in f: # Iterate each mapping row + parts = line.strip().split() # Split on whitespace for TSV + if len(parts) >= 6: # Guard against malformed lines + # Map field ID to the date column name + field_dict[parts[0]] = parts[5] + date_vars.append(parts[5]) # Track date column names in order + +for j in range(17): # Map up to 17 cancer entry slots (dates and types) + # Cancer diagnosis date slot j + field_dict[f'40005-{j}.0'] = f'cancer_date_{j}' + field_dict[f'40006-{j}.0'] = f'cancer_type_{j}' # Cancer type/code slot j + +# Number of ICD-related date columns before adding extras +len_icd = len(date_vars) +date_vars.extend(['Death', 'date_of_assessment'] + # Add outcome date and assessment date + # Add cancer date columns + [f'cancer_date_{j}' for j in range(17)]) + +labels_file = "labels.csv" # File listing label codes +label_dict = {} # Map code string -> integer label id +with open(labels_file, "r", encoding="utf-8") as f: # Open labels file + for idx, line in enumerate(f): # Enumerate to assign incremental label IDs + parts = line.strip().split(' ') # Split by space + if parts and parts[0]: # Guard against empty lines + label_dict[parts[0]] = idx + +event_list = [] # Accumulator for event arrays across chunks +ukb_iterator = pd.read_csv( # Stream UK Biobank data in chunks + "../ukb_data.csv", + sep=',', + chunksize=10000, # Stream file in manageable chunks to reduce memory footprint + # First column (participant ID) becomes DataFrame index + index_col=0, + low_memory=False # Disable type inference optimization for consistent dtypes +) +# Iterate chunks with progress +for ukb_chunk in tqdm.tqdm(ukb_iterator, desc="Processing UK Biobank data"): + # Rename columns to friendly names + ukb_chunk = ukb_chunk.rename(columns=field_dict) + # Require sex to be present + ukb_chunk.dropna(subset=['sex'], inplace=True) + ukb_chunk['sex'] += 2 # Recode sex: 0-> 2, 1 -> 3 + + # Construct date of birth from year and month (day fixed to 1) + ukb_chunk['dob'] = pd.to_datetime( + # Guard against malformed dates + ukb_chunk[['year', 'month']].assign(DAY=1), errors='coerce' + ) + + # Use only date variables that actually exist in the current chunk + present_date_vars = [c for c in date_vars if c in ukb_chunk.columns] + + # Convert date-like columns to datetime and compute day offsets from dob + if present_date_vars: + date_cols = ukb_chunk[present_date_vars].apply( + pd.to_datetime, format="%Y-%m-%d", errors='coerce' # Parse dates safely + ) + date_cols_days = date_cols.sub( + ukb_chunk['dob'], axis=0) # Timedelta relative to dob + ukb_chunk[present_date_vars] = date_cols_days.apply( + lambda x: x.dt.days) # Store days since dob + + # Process disease events from ICD10-related date columns + # Take ICD date cols plus 'Death' if present by order + icd10_cols = present_date_vars[:len_icd + 1] + # Melt to long form: participant id, event code (column name), and days offset + melted_df = ukb_chunk.reset_index().melt( + id_vars=['eid'], + value_vars=icd10_cols, + var_name='event_code', + value_name='days', + ) + # Require non-missing day offsets + melted_df.dropna(subset=['days'], inplace=True) + if not melted_df.empty: + melted_df['label'] = melted_df['event_code'].map( + label_dict) # Map event code to numeric label + # Fix: ensure labels exist before int cast + melted_df.dropna(subset=['label'], inplace=True) + if not melted_df.empty: + event_list.append( + melted_df[['eid', 'days', 'label']] + .astype(int) # Safe now since label and days are non-null + .to_numpy() + ) + + df_res = ukb_chunk.reset_index() # Bring participant ID out of index + # Simplify stub names for wide_to_long + # Rename date stubs + rename_dict = {f'cancer_date_{j}': f'cancerdate{j}' for j in range(17)} + rename_dict.update( + # Rename type stubs + {f'cancer_type_{j}': f'cancertype{j}' for j in range(17)}) + df_renamed = df_res.rename(columns=rename_dict) # Apply renaming + stubs_to_use = [] # Collect available stubs + if any('cancerdate' in col for col in df_renamed.columns): + stubs_to_use.append('cancerdate') # Date stub present + if any('cancertype' in col for col in df_renamed.columns): + stubs_to_use.append('cancertype') # Type stub present + + if len(stubs_to_use) == 2: # Only proceed if both date and type columns exist + long_cancer = pd.wide_to_long( + df_renamed, + stubnames=stubs_to_use, + i=['eid'], # Participant ID identifier + j='cancer_num' # Index over cancer record number (0..16) + ).dropna() # Remove rows missing either date or type + if not long_cancer.empty: + long_cancer['cancer'] = long_cancer['cancertype'].str.slice( + 0, 3) # Use first 3 chars as code + long_cancer['cancer_label'] = long_cancer['cancer'].map( + label_dict) # Map to label id + cancer_array = ( + long_cancer.reset_index( + )[['eid', 'cancerdate', 'cancer_label']] + .dropna() + .astype(int) + .to_numpy() + ) + if cancer_array.size > 0: + event_list.append(cancer_array) # Append cancer events + + # Process BMI, smoking, and alcohol status + ukb_bmi = ukb_chunk[['date_of_assessment', 'bmi']].dropna().reset_index() + if not ukb_bmi.empty: + ukb_bmi['bmi_status'] = np.select( + [ukb_bmi['bmi'] > 28, ukb_bmi['bmi'] > 22], + [6, 5], + default=4 + ) + event_list.append( + ukb_bmi[['eid', 'date_of_assessment', 'bmi_status']] + .astype(int) + .to_numpy() + ) + + ukb_sm = ukb_chunk[['date_of_assessment', 'smoking']].dropna().reset_index() + ukb_sm = ukb_sm[ukb_sm['smoking'] != -3] # Exclude unknown smoking status + if not ukb_sm.empty: + ukb_sm['smoking_status'] = np.select( + [ukb_sm['smoking'] == 1, ukb_sm['smoking'] == 2], + [9, 8], + default=7 + ) + event_list.append( + ukb_sm[['eid', 'date_of_assessment', 'smoking_status']] + .astype(int) + .to_numpy() + ) + ukb_al = ukb_chunk[['date_of_assessment', 'alcohol']].dropna().reset_index() + ukb_al = ukb_al[ukb_al['alcohol'] != -3] # Exclude unknown alcohol status + if not ukb_al.empty: + ukb_al['alcohol_status'] = np.select( + [ukb_al['alcohol'] == 1, ukb_al['alcohol'] < 4], + [12, 11], + default=10 + ) + event_list.append( + ukb_al[['eid', 'date_of_assessment', 'alcohol_status']] + .astype(int) + .to_numpy() + ) + +# Combine tabular chunks + +data = np.vstack(event_list) # Stack all event arrays into one + +# Sort by participant then day +data = data[np.lexsort((data[:, 1], data[:, 0]))] + +# Keep only events with non-negative day offsets +data = data[data[:, 1] >= 0] + +# Remove duplicate (participant_id, label) pairs keeping first occurrence. +data = pd.DataFrame(data).drop_duplicates([0, 2]).values + +# Store compactly using unsigned 32-bit integers +data = data.astype(np.uint32) + +# Split data into train/val/test based on unique participant IDs +unique_ids = np.unique(data[:, 0]) # Unique participant IDs +train_split_id = unique_ids[int(len(unique_ids) * train_frac)] +val_split_id = unique_ids[int(len(unique_ids) * (train_frac + val_frac))] + +train_data = data[data[:, 0] <= train_split_id].tofile("ukb_real_train.bin") +val_data = data[(data[:, 0] > train_split_id) & ( + data[:, 0] <= val_split_id)].tofile("ukb_real_val.bin") +test_data = data[data[:, 0] > val_split_id].tofile("ukb_real_test.bin") diff --git a/field_id.txt b/field_id.txt new file mode 100644 index 0000000..1b762cc --- /dev/null +++ b/field_id.txt @@ -0,0 +1,1237 @@ +eid +31-0.0 +34-0.0 +48-0.0 +49-0.0 +50-0.0 +52-0.0 +53-0.0 +74-0.0 +102-0.0 +1239-0.0 +1558-0.0 +4079-0.0 +4080-0.0 +20150-0.0 +20151-0.0 +20258-0.0 +21001-0.0 +21003-0.0 +30000-0.0 +30010-0.0 +30020-0.0 +30030-0.0 +30040-0.0 +30050-0.0 +30060-0.0 +30080-0.0 +30100-0.0 +30120-0.0 +30130-0.0 +30140-0.0 +30150-0.0 +30160-0.0 +30170-0.0 +30250-0.0 +30260-0.0 +30270-0.0 +30280-0.0 +30300-0.0 +30500-0.0 +30510-0.0 +30520-0.0 +30530-0.0 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+40006-2.0 +40005-3.0 +40006-3.0 +40005-4.0 +40006-4.0 +40005-5.0 +40006-5.0 +40005-6.0 +40006-6.0 +40005-7.0 +40006-7.0 +40005-8.0 +40006-8.0 +40005-9.0 +40006-9.0 +40005-10.0 +40006-10.0 +40005-11.0 +40006-11.0 +40005-12.0 +40006-12.0 +40005-13.0 +40006-13.0 +40005-14.0 +40006-14.0 +40005-15.0 +40006-15.0 +40005-16.0 +40006-16.0 diff --git a/field_ids_enriched.csv b/field_ids_enriched.csv new file mode 100644 index 0000000..5243d11 --- /dev/null +++ b/field_ids_enriched.csv @@ -0,0 +1,74 @@ +field_instance,full_name,var_name +31-0.0,Sex,sex +34-0.0,Year of birth,year +48-0.0,Waist circumference,waist_circumference +49-0.0,Hip circumference,hip_circumference +50-0.0,Standing height,standing_height +52-0.0,Month of birth,month +53-0.0,Date of attending assessment centre,date_of_assessment +74-0.0,Fasting time,fasting_time +102-0.0,Pulse rate automated reading,pulse_rate +1239-0.0,Current tobacco smoking,smoking +1558-0.0,Alcohol intake frequency.,alcohol +4079-0.0,Diastolic blood pressure automated reading,dbp +4080-0.0,Systolic blood pressure automated reading,sbp +20150-0.0,Forced expiratory volume in 1-second (FEV1) Best measure,fev1_best +20151-0.0,Forced vital capacity (FVC) Best measure,fvc_best +20258-0.0,FEV1/ FVC ratio Z-score,fev1_fvc_ratio +21001-0.0,Body mass index (BMI),bmi +21003-0.0,Age when attended assessment centre,age_at_assessment +30000-0.0,White blood cell (leukocyte) count,WBC +30010-0.0,Red blood cell (erythrocyte) count,RBC +30020-0.0,Haemoglobin concentration,hemoglobin +30030-0.0,Haematocrit percentage,hematocrit +30040-0.0,Mean corpuscular volume,MCV +30050-0.0,Mean corpuscular haemoglobin,MCH +30060-0.0,Mean corpuscular haemoglobin concentration,MCHC +30080-0.0,Platelet count,Pc +30100-0.0,Mean platelet (thrombocyte) volume,MPV +30120-0.0,Lymphocyte count,LymC +30130-0.0,Monocyte count,MonC +30140-0.0,Neutrophill count,NeuC +30150-0.0,Eosinophill count,EosC +30160-0.0,Basophill count,BasC +30170-0.0,Nucleated red blood cell count,nRBC +30250-0.0,Reticulocyte count,RC +30260-0.0,Mean reticulocyte volume,MRV +30270-0.0,Mean sphered cell volume,MSCV +30280-0.0,Immature reticulocyte fraction,IRF +30300-0.0,High light scatter reticulocyte count,HLSRC +30500-0.0,Microalbumin in urine,MicU +30510-0.0,Creatinine (enzymatic) in urine,CreaU +30520-0.0,Potassium in urine,PotU +30530-0.0,Sodium in urine,SodU +30600-0.0,Albumin,Alb +30610-0.0,Alkaline phosphatase,ALP +30620-0.0,Alanine aminotransferase,Alanine +30630-0.0,Apolipoprotein A,ApoA +30640-0.0,Apolipoprotein B,ApoB +30650-0.0,Aspartate aminotransferase,AA +30660-0.0,Direct bilirubin,DBil +30670-0.0,Urea,Urea +30680-0.0,Calcium,Calcium +30690-0.0,Cholesterol,Cholesterol +30700-0.0,Creatinine,Creatinine +30710-0.0,C-reactive protein,CRP +30720-0.0,Cystatin C,CystatinC +30730-0.0,Gamma glutamyltransferase,GGT +30740-0.0,Glucose,Glu +30750-0.0,Glycated haemoglobin (HbA1c),HbA1c +30760-0.0,HDL cholesterol,HDL +30770-0.0,IGF-1,IGF1 +30780-0.0,LDL direct,LDL +30790-0.0,Lipoprotein A,LpA +30800-0.0,Oestradiol,Oestradiol +30810-0.0,Phosphate,Phosphate +30820-0.0,Rheumatoid factor,Rheu +30830-0.0,SHBG,SHBG +30840-0.0,Total bilirubin,TotalBil +30850-0.0,Testosterone,Testosterone +30860-0.0,Total protein,TotalProtein +30870-0.0,Triglycerides,Tri +30880-0.0,Urate,Urate +30890-0.0,Vitamin D,VitaminD +40000-0.0,Date of death,Death diff --git a/icd10_codes_mod.tsv b/icd10_codes_mod.tsv new file mode 100644 index 0000000..54059e4 --- /dev/null +++ b/icd10_codes_mod.tsv @@ -0,0 +1,1129 @@ +130000-0.0 Source of report of A00 (cholera) +130002-0.0 Source of report of A01 (typhoid and paratyphoid fevers) +130004-0.0 Source of report of A02 (other salmonella infections) +130006-0.0 Source of report of A03 (shigellosis) +130008-0.0 Source of report of A04 (other bacterial intestinal infections) +130010-0.0 Source of report of A05 (other bacterial foodborne intoxications) +130012-0.0 Source of report of A06 (amoebiasis) +130014-0.0 Source of report of A07 (other protozoal intestinal diseases) +130016-0.0 Source of report of A08 (viral and other specified intestinal infections) +130018-0.0 Source of report of A09 (diarrhoea and gastro-enteritis of presumed infectious origin) +130020-0.0 "Source of report of A15 (respiratory tuberculosis, bacteriologically and histologically confirmed)" +130022-0.0 "Source of report of A16 (respiratory tuberculosis, not confirmed bacteriologically or histologically)" +130024-0.0 Source of report of A17 (tuberculosis of nervous system) +130026-0.0 Source of report of A18 (tuberculosis of other organs) +130028-0.0 Source of report of A19 (miliary tuberculosis) +130030-0.0 Source of report of A20 (plague) +130034-0.0 Source of report of A22 (anthrax) +130036-0.0 Source of report of A23 (brucellosis) +130038-0.0 Source of report of A24 (glanders and melioidosis) +130040-0.0 Source of report of A25 (rat-bite fevers) +130042-0.0 Source of report of A26 (erysipeloid) +130044-0.0 Source of report of A27 (leptospirosis) +130046-0.0 "Source of report of A28 (other zoonotic bacterial diseases, not elsewhere classified)" +130048-0.0 Source of report of A30 (leprosy [hansen's disease]) +130050-0.0 Source of report of A31 (infection due to other mycobacteria) +130052-0.0 Source of report of A32 (listeriosis) +130054-0.0 Source of report of A33 (tetanus neonatorum) +130058-0.0 Source of report of A35 (other tetanus) +130060-0.0 Source of report of A36 (diphtheria) +130062-0.0 Source of report of A37 (whooping cough) +130064-0.0 Source of report of A38 (scarlet fever) +130066-0.0 Source of report of A39 (meningococcal infection) +130068-0.0 Source of report of A40 (streptococcal septicaemia) +130070-0.0 Source of report of A41 (other septicaemia) +130072-0.0 Source of report of A42 (actinomycosis) +130074-0.0 Source of report of A43 (nocardiosis) +130076-0.0 Source of report of A44 (bartonellosis) +130078-0.0 Source of report of A46 (erysipelas) +130080-0.0 "Source of report of A48 (other bacterial diseases, not elsewhere classified)" +130082-0.0 Source of report of A49 (bacterial infection of unspecified site) +130084-0.0 Source of report of A50 (congenital syphilis) +130086-0.0 Source of report of A51 (early syphilis) +130088-0.0 Source of report of A52 (late syphilis) +130090-0.0 Source of report of A53 (other and unspecified syphilis) +130092-0.0 Source of report of A54 (gonococcal infection) +130094-0.0 Source of report of A55 (chlamydial lymphogranuloma (venereum)) +130096-0.0 Source of report of A56 (other sexually transmitted chlamydial diseases) +130100-0.0 Source of report of A58 (granuloma inguinale) +130102-0.0 Source of report of A59 (trichomoniasis) +130104-0.0 Source of report of A60 (anogenital herpesviral [herpes simplex] infections) +130106-0.0 "Source of report of A63 (other predominantly sexually transmitted diseases, not elsewhere classified)" +130108-0.0 Source of report of A64 (unspecified sexually transmitted disease) +130112-0.0 Source of report of A66 (yaws) +130114-0.0 Source of report of A67 (pinta [carate]) +130116-0.0 Source of report of A68 (relapsing fevers) +130118-0.0 Source of report of A69 (other spirochaetal infections) +130120-0.0 Source of report of A70 (chlamydia psittaci infection) +130122-0.0 Source of report of A71 (trachoma) +130124-0.0 Source of report of A74 (other diseases caused by chlamydiae) +130126-0.0 Source of report of A75 (typhus fever) +130128-0.0 Source of report of A77 (spotted fever [tick-borne rickettsioses]) +130130-0.0 Source of report of A78 (q fever) +130132-0.0 Source of report of A79 (other rickettsioses) +130134-0.0 Source of report of A80 (acute poliomyelitis) +130136-0.0 Source of report of A81 (atypical virus infections of central nervous system) +130138-0.0 Source of report of A82 (rabies) +130140-0.0 Source of report of A83 (mosquito-borne viral encephalitis) +130142-0.0 Source of report of A84 (tick-borne viral encephalitis) +130144-0.0 "Source of report of A85 (other viral encephalitis, not elsewhere classified)" +130146-0.0 Source of report of A86 (unspecified viral encephalitis) +130148-0.0 Source of report of A87 (viral meningitis) +130150-0.0 "Source of report of A88 (other viral infections of central nervous system, not elsewhere classified)" +130152-0.0 Source of report of A89 (unspecified viral infection of central nervous system) +130154-0.0 Source of report of A90 (dengue fever [classical dengue]) +130156-0.0 Source of report of A91 (dengue haemorrhagic fever) +130158-0.0 Source of report of A92 (other mosquito-borne viral fevers) +130160-0.0 "Source of report of A93 (other arthropod-borne viral fevers, not elsewhere classified)" +130162-0.0 Source of report of A94 (unspecified arthropod-borne viral fever) +130164-0.0 Source of report of A95 (yellow fever) +130168-0.0 Source of report of A97 (dengue) +130170-0.0 "Source of report of A98 (other viral haemorrhagic fevers, not elsewhere classified)" +130174-0.0 Source of report of B00 (herpesviral [herpes simplex] infections) +130176-0.0 Source of report of B01 (varicella [chickenpox]) +130178-0.0 Source of report of B02 (zoster [herpes zoster]) +130180-0.0 Source of report of B03 (smallpox) +130184-0.0 Source of report of B05 (measles) +130186-0.0 Source of report of B06 (rubella [german measles]) +130188-0.0 Source of report of B07 (viral warts) +130190-0.0 "Source of report of B08 (other viral infections characterised by skin and mucous membrane lesions, not elsewhere classified)" +130192-0.0 Source of report of B09 (unspecified viral infection characterised by skin and mucous membrane lesions) +130194-0.0 Source of report of B15 (acute hepatitis a) +130196-0.0 Source of report of B16 (acute hepatitis b) +130198-0.0 Source of report of B17 (other acute viral hepatitis) +130200-0.0 Source of report of B18 (chronic viral hepatitis) +130202-0.0 Source of report of B19 (unspecified viral hepatitis) +130204-0.0 Source of report of B20 (human immunodeficiency virus [hiv] disease resulting in infectious and parasitic diseases) +130206-0.0 Source of report of B21 (human immunodeficiency virus [hiv] disease resulting in malignant neoplasms) +130208-0.0 Source of report of B22 (human immunodeficiency virus [hiv] disease resulting in other specified diseases) +130210-0.0 Source of report of B23 (human immunodeficiency virus [hiv] disease resulting in other conditions) +130212-0.0 Source of report of B24 (unspecified human immunodeficiency virus [hiv] disease) +130214-0.0 Source of report of B25 (cytomegaloviral disease) +130216-0.0 Source of report of B26 (mumps) +130218-0.0 Source of report of B27 (infectious mononucleosis) +130220-0.0 Source of report of B30 (viral conjunctivitis) +130222-0.0 "Source of report of B33 (other viral diseases, not elsewhere classified)" +130224-0.0 Source of report of B34 (viral infection of unspecified site) +130226-0.0 Source of report of B35 (dermatophytosis) +130228-0.0 Source of report of B36 (other superficial mycoses) +130230-0.0 Source of report of B37 (candidiasis) +130232-0.0 Source of report of B38 (coccidioidomycosis) +130234-0.0 Source of report of B39 (histoplasmosis) +130236-0.0 Source of report of B40 (blastomycosis) +130240-0.0 Source of report of B42 (sporotrichosis) +130242-0.0 Source of report of B43 (chromomycosis and phaeomycotic abscess) +130244-0.0 Source of report of B44 (aspergillosis) +130246-0.0 Source of report of B45 (cryptococcosis) +130248-0.0 Source of report of B46 (zygomycosis) +130250-0.0 Source of report of B47 (mycetoma) +130252-0.0 "Source of report of B48 (other mycoses, not elsewhere classified)" +130254-0.0 Source of report of B49 (unspecified mycosis) +130256-0.0 Source of report of B50 (plasmodium falciparum malaria) +130258-0.0 Source of report of B51 (plasmodium vivax malaria) +130260-0.0 Source of report of B52 (plasmodium malariae malaria) +130262-0.0 Source of report of B53 (other parasitologically confirmed malaria) +130264-0.0 Source of report of B54 (unspecified malaria) +130266-0.0 Source of report of B55 (leishmaniasis) +130270-0.0 Source of report of B57 (chagas' disease) +130272-0.0 Source of report of B58 (toxoplasmosis) +130274-0.0 Source of report of B59 (pneumocystosis) +130276-0.0 "Source of report of B60 (other protozoal diseases, not elsewhere classified)" +130280-0.0 Source of report of B65 (schistosomiasis [bilharziasis]) +130282-0.0 Source of report of B66 (other fluke infections) +130284-0.0 Source of report of B67 (echinococcosis) +130286-0.0 Source of report of B68 (taeniasis) +130288-0.0 Source of report of B69 (cysticercosis) +130292-0.0 Source of report of B71 (other cestode infections) +130296-0.0 Source of report of B73 (onchocerciasis) +130298-0.0 Source of report of B74 (filariasis) +130300-0.0 Source of report of B75 (trichinellosis) +130302-0.0 Source of report of B76 (hookworm diseases) +130304-0.0 Source of report of B77 (ascariasis) +130306-0.0 Source of report of B78 (strongyloidiasis) +130308-0.0 Source of report of B79 (trichuriasis) +130310-0.0 Source of report of B80 (enterobiasis) +130312-0.0 "Source of report of B81 (other intestinal helminthiases, not elsewhere classified)" +130314-0.0 Source of report of B82 (unspecified intestinal parasitism) +130316-0.0 Source of report of B83 (other helminthiases) +130318-0.0 Source of report of B85 (pediculosis and phthiriasis) +130320-0.0 Source of report of B86 (scabies) +130322-0.0 Source of report of B87 (myiasis) +130324-0.0 Source of report of B88 (other infestations) +130326-0.0 Source of report of B89 (unspecified parasitic disease) +130328-0.0 Source of report of B90 (sequelae of tuberculosis) +130330-0.0 Source of report of B91 (sequelae of poliomyelitis) +130334-0.0 Source of report of B94 (sequelae of other and unspecified infectious and parasitic diseases) +130336-0.0 Source of report of B95 (streptococcus and staphylococcus as the cause of diseases classified to other chapters) +130338-0.0 Source of report of B96 (other bacterial agents as the cause of diseases classified to other chapters) +130340-0.0 Source of report of B97 (viral agents as the cause of diseases classified to other chapters) +130342-0.0 Source of report of B98 (other specified infectious agents as the cause of diseases classified to other chapters) +130344-0.0 Source of report of B99 (other and unspecified infectious diseases) +130622-0.0 Source of report of D50 (iron deficiency anaemia) +130624-0.0 Source of report of D51 (vitamin b12 deficiency anaemia) +130626-0.0 Source of report of D52 (folate deficiency anaemia) +130628-0.0 Source of report of D53 (other nutritional anaemias) +130630-0.0 Source of report of D55 (anaemia due to enzyme disorders) +130632-0.0 Source of report of D56 (thalassaemia) +130634-0.0 Source of report of D57 (sickle-cell disorders) +130636-0.0 Source of report of D58 (other hereditary haemolytic anaemias) +130638-0.0 Source of report of D59 (acquired haemolytic anaemia) +130640-0.0 Source of report of D60 (acquired pure red cell aplasia [erythroblastopenia]) +130642-0.0 Source of report of D61 (other aplastic anaemias) +130644-0.0 Source of report of D62 (acute posthaemorrhagic anaemia) +130646-0.0 Source of report of D63 (anaemia in chronic diseases classified elsewhere) +130648-0.0 Source of report of D64 (other anaemias) +130650-0.0 Source of report of D65 (disseminated intravascular coagulation [defibrination syndrome]) +130652-0.0 Source of report of D66 (hereditary factor viii deficiency) +130654-0.0 Source of report of D67 (hereditary factor ix deficiency) +130656-0.0 Source of report of D68 (other coagulation defects) +130658-0.0 Source of report of D69 (purpura and other haemorrhagic conditions) +130660-0.0 Source of report of D70 (agranulocytosis) +130662-0.0 Source of report of D71 (functional disorders of polymorphonuclear neutrophils) +130664-0.0 Source of report of D72 (other disorders of white blood cells) +130666-0.0 Source of report of D73 (diseases of spleen) +130668-0.0 Source of report of D74 (methaemoglobinaemia) +130670-0.0 Source of report of D75 (other diseases of blood and blood-forming organs) +130672-0.0 Source of report of D76 (certain diseases involving lymphoreticular tissue and reticulohistiocytic system) +130674-0.0 Source of report of D77 (other disorders of blood and blood-forming organs in diseases classified elsewhere) +130676-0.0 Source of report of D80 (immunodeficiency with predominantly antibody defects) +130678-0.0 Source of report of D81 (combined immunodeficiencies) +130680-0.0 Source of report of D82 (immunodeficiency associated with other major defects) +130682-0.0 Source of report of D83 (common variable immunodeficiency) +130684-0.0 Source of report of D84 (other immunodeficiencies) +130686-0.0 Source of report of D86 (sarcoidosis) +130688-0.0 "Source of report of D89 (other disorders involving the immune mechanism, not elsewhere classified)" +130692-0.0 Source of report of E01 (iodine-deficiency-related thyroid disorders and allied conditions) +130694-0.0 Source of report of E02 (subclinical iodine-deficiency hypothyroidism) +130696-0.0 Source of report of E03 (other hypothyroidism) +130698-0.0 Source of report of E04 (other non-toxic goitre) +130700-0.0 Source of report of E05 (thyrotoxicosis [hyperthyroidism]) +130702-0.0 Source of report of E06 (thyroiditis) +130704-0.0 Source of report of E07 (other disorders of thyroid) +130706-0.0 Source of report of E10 (insulin-dependent diabetes mellitus) +130708-0.0 Source of report of E11 (non-insulin-dependent diabetes mellitus) +130710-0.0 Source of report of E12 (malnutrition-related diabetes mellitus) +130712-0.0 Source of report of E13 (other specified diabetes mellitus) +130714-0.0 Source of report of E14 (unspecified diabetes mellitus) +130716-0.0 Source of report of E15 (nondiabetic hypoglycaemic coma) +130718-0.0 Source of report of E16 (other disorders of pancreatic internal secretion) +130720-0.0 Source of report of E20 (hypoparathyroidism) +130722-0.0 Source of report of E21 (hyperparathyroidism and other disorders of parathyroid gland) +130724-0.0 Source of report of E22 (hyperfunction of pituitary gland) +130726-0.0 Source of report of E23 (hypofunction and other disorders of pituitary gland) +130728-0.0 Source of report of E24 (cushing's syndrome) +130730-0.0 Source of report of E25 (adrenogenital disorders) +130732-0.0 Source of report of E26 (hyperaldosteronism) +130734-0.0 Source of report of E27 (other disorders of adrenal gland) +130736-0.0 Source of report of E28 (ovarian dysfunction) +130738-0.0 Source of report of E29 (testicular dysfunction) +130740-0.0 "Source of report of E30 (disorders of puberty, not elsewhere classified)" +130742-0.0 Source of report of E31 (polyglandular dysfunction) +130744-0.0 Source of report of E32 (diseases of thymus) +130746-0.0 Source of report of E34 (other endocrine disorders) +130748-0.0 Source of report of E35 (disorders of endocrine glands in diseases classified elsewhere) +130752-0.0 Source of report of E41 (nutritional marasmus) +130756-0.0 Source of report of E43 (unspecified severe protein-energy malnutrition) +130758-0.0 Source of report of E44 (protein-energy malnutrition of moderate and mild degree) +130760-0.0 Source of report of E45 (retarded development following protein-energy malnutrition) +130762-0.0 Source of report of E46 (unspecified protein-energy malnutrition) +130764-0.0 Source of report of E50 (vitamin a deficiency) +130766-0.0 Source of report of E51 (thiamine deficiency) +130768-0.0 Source of report of E52 (niacin deficiency [pellagra]) +130770-0.0 Source of report of E53 (deficiency of other b group vitamins) +130772-0.0 Source of report of E54 (ascorbic acid deficiency) +130774-0.0 Source of report of E55 (vitamin d deficiency) +130776-0.0 Source of report of E56 (other vitamin deficiencies) +130778-0.0 Source of report of E58 (dietary calcium deficiency) +130780-0.0 Source of report of E59 (dietary selenium deficiency) +130782-0.0 Source of report of E60 (dietary zinc deficiency) +130784-0.0 Source of report of E61 (deficiency of other nutrient elements) +130786-0.0 Source of report of E63 (other nutritional deficiencies) +130788-0.0 Source of report of E64 (sequelae of malnutrition and other nutritional deficiencies) +130790-0.0 Source of report of E65 (localised adiposity) +130792-0.0 Source of report of E66 (obesity) +130794-0.0 Source of report of E67 (other hyperalimentation) +130796-0.0 Source of report of E68 (sequelae of hyperalimentation) +130798-0.0 Source of report of E70 (disorders of aromatic amino-acid metabolism) +130800-0.0 Source of report of E71 (disorders of branched-chain amino-acid metabolism and fatty-acid metabolism) +130802-0.0 Source of report of E72 (other disorders of amino-acid metabolism) +130804-0.0 Source of report of E73 (lactose intolerance) +130806-0.0 Source of report of E74 (other disorders of carbohydrate metabolism) +130808-0.0 Source of report of E75 (disorders of sphingolipid metabolism and other lipid storage disorders) +130810-0.0 Source of report of E76 (disorders of glycosaminoglycan metabolism) +130812-0.0 Source of report of E77 (disorders of glycoprotein metabolism) +130814-0.0 Source of report of E78 (disorders of lipoprotein metabolism and other lipidaemias) +130816-0.0 Source of report of E79 (disorders of purine and pyrimidine metabolism) +130818-0.0 Source of report of E80 (disorders of porphyrin and bilirubin metabolism) +130820-0.0 Source of report of E83 (disorders of mineral metabolism) +130822-0.0 Source of report of E84 (cystic fibrosis) +130824-0.0 Source of report of E85 (amyloidosis) +130826-0.0 Source of report of E86 (volume depletion) +130828-0.0 "Source of report of E87 (other disorders of fluid, electrolyte and acid-base balance)" +130830-0.0 Source of report of E88 (other metabolic disorders) +130832-0.0 "Source of report of E89 (postprocedural endocrine and metabolic disorders, not elsewhere classified)" +130836-0.0 Source of report of F00 (dementia in alzheimer's disease) +130838-0.0 Source of report of F01 (vascular dementia) +130840-0.0 Source of report of F02 (dementia in other diseases classified elsewhere) +130842-0.0 Source of report of F03 (unspecified dementia) +130844-0.0 "Source of report of F04 (organic amnesic syndrome, not induced by alcohol and other psychoactive substances)" +130846-0.0 "Source of report of F05 (delirium, not induced by alcohol and other psychoactive substances)" +130848-0.0 Source of report of F06 (other mental disorders due to brain damage and dysfunction and to physical disease) +130850-0.0 "Source of report of F07 (personality and behavioural disorders due to brain disease, damage and dysfunction)" +130852-0.0 Source of report of F09 (unspecified organic or symptomatic mental disorder) +130854-0.0 Source of report of F10 (mental and behavioural disorders due to use of alcohol) +130856-0.0 Source of report of F11 (mental and behavioural disorders due to use of opioids) +130858-0.0 Source of report of F12 (mental and behavioural disorders due to use of cannabinoids) +130860-0.0 Source of report of F13 (mental and behavioural disorders due to use of sedatives or hypnotics) +130862-0.0 Source of report of F14 (mental and behavioural disorders due to use of cocaine) +130864-0.0 "Source of report of F15 (mental and behavioural disorders due to use of other stimulants, including caffeine)" +130866-0.0 Source of report of F16 (mental and behavioural disorders due to use of hallucinogens) +130868-0.0 Source of report of F17 (mental and behavioural disorders due to use of tobacco) +130870-0.0 Source of report of F18 (mental and behavioural disorders due to use of volatile solvents) +130872-0.0 Source of report of F19 (mental and behavioural disorders due to multiple drug use and use of other psychoactive substances) +130874-0.0 Source of report of F20 (schizophrenia) +130876-0.0 Source of report of F21 (schizotypal disorder) +130878-0.0 Source of report of F22 (persistent delusional disorders) +130880-0.0 Source of report of F23 (acute and transient psychotic disorders) +130882-0.0 Source of report of F24 (induced delusional disorder) +130884-0.0 Source of report of F25 (schizoaffective disorders) +130886-0.0 Source of report of F28 (other nonorganic psychotic disorders) +130888-0.0 Source of report of F29 (unspecified nonorganic psychosis) +130890-0.0 Source of report of F30 (manic episode) +130892-0.0 Source of report of F31 (bipolar affective disorder) +130894-0.0 Source of report of F32 (depressive episode) +130896-0.0 Source of report of F33 (recurrent depressive disorder) +130898-0.0 Source of report of F34 (persistent mood [affective] disorders) +130900-0.0 Source of report of F38 (other mood [affective] disorders) +130902-0.0 Source of report of F39 (unspecified mood [affective] disorder) +130904-0.0 Source of report of F40 (phobic anxiety disorders) +130906-0.0 Source of report of F41 (other anxiety disorders) +130908-0.0 Source of report of F42 (obsessive-compulsive disorder) +130910-0.0 "Source of report of F43 (reaction to severe stress, and adjustment disorders)" +130912-0.0 Source of report of F44 (dissociative [conversion] disorders) +130914-0.0 Source of report of F45 (somatoform disorders) +130916-0.0 Source of report of F48 (other neurotic disorders) +130918-0.0 Source of report of F50 (eating disorders) +130920-0.0 Source of report of F51 (nonorganic sleep disorders) +130922-0.0 "Source of report of F52 (sexual dysfunction, not caused by organic disorder or disease)" +130924-0.0 "Source of report of F53 (mental and behavioural disorders associated with the puerperium, not elsewhere classified)" +130926-0.0 Source of report of F54 (psychological and behavioural factors associated with disorders or diseases classified elsewhere) +130928-0.0 Source of report of F55 (abuse of non-dependence-producing substances) +130930-0.0 Source of report of F59 (unspecified behavioural syndromes associated with physiological disturbances and physical factors) +130932-0.0 Source of report of F60 (specific personality disorders) +130934-0.0 Source of report of F61 (mixed and other personality disorders) +130936-0.0 "Source of report of F62 (enduring personality changes, not attributable to brain damage and disease)" +130938-0.0 Source of report of F63 (habit and impulse disorders) +130940-0.0 Source of report of F64 (gender identity disorders) +130942-0.0 Source of report of F65 (disorders of sexual preference) +130944-0.0 Source of report of F66 (psychological and behavioural disorders associated with sexual development and orientation) +130946-0.0 Source of report of F68 (other disorders of adult personality and behaviour) +130948-0.0 Source of report of F69 (unspecified disorder of adult personality and behaviour) +130950-0.0 Source of report of F70 (mild mental retardation) +130952-0.0 Source of report of F71 (moderate mental retardation) +130954-0.0 Source of report of F72 (severe mental retardation) +130958-0.0 Source of report of F78 (other mental retardation) +130960-0.0 Source of report of F79 (unspecified mental retardation) +130962-0.0 Source of report of F80 (specific developmental disorders of speech and language) +130964-0.0 Source of report of F81 (specific developmental disorders of scholastic skills) +130966-0.0 Source of report of F82 (specific developmental disorder of motor function) +130968-0.0 Source of report of F83 (mixed specific developmental disorders) +130970-0.0 Source of report of F84 (pervasive developmental disorders) +130972-0.0 Source of report of F88 (other disorders of psychological development) +130974-0.0 Source of report of F89 (unspecified disorder of psychological development) +130976-0.0 Source of report of F90 (hyperkinetic disorders) +130978-0.0 Source of report of F91 (conduct disorders) +130980-0.0 Source of report of F92 (mixed disorders of conduct and emotions) +130982-0.0 Source of report of F93 (emotional disorders with onset specific to childhood) +130984-0.0 Source of report of F94 (disorders of social functioning with onset specific to childhood and adolescence) +130986-0.0 Source of report of F95 (tic disorders) +130988-0.0 Source of report of F98 (other behavioural and emotional disorders with onset usually occurring in childhood and adolescence) +130990-0.0 "Source of report of F99 (mental disorder, not otherwise specified)" +130992-0.0 "Source of report of G00 (bacterial meningitis, not elsewhere classified)" +130994-0.0 Source of report of G01 (meningitis in bacterial diseases classified elsewhere) +130996-0.0 Source of report of G02 (meningitis in other infectious and parasitic diseases classified elsewhere) +130998-0.0 Source of report of G03 (meningitis due to other and unspecified causes) +131000-0.0 "Source of report of G04 (encephalitis, myelitis and encephalomyelitis)" +131002-0.0 "Source of report of G05 (encephalitis, myelitis and encephalomyelitis in diseases classified elsewhere)" +131004-0.0 Source of report of G06 (intracranial and intraspinal abscess and granuloma) +131006-0.0 Source of report of G07 (intracranial and intraspinal abscess and granuloma in diseases classified elsewhere) +131008-0.0 Source of report of G08 (intracranial and intraspinal phlebitis and thrombophlebitis) +131010-0.0 Source of report of G09 (sequelae of inflammatory diseases of central nervous system) +131012-0.0 Source of report of G10 (huntington's disease) +131014-0.0 Source of report of G11 (hereditary ataxia) +131016-0.0 Source of report of G12 (spinal muscular atrophy and related syndromes) +131018-0.0 Source of report of G13 (systemic atrophies primarily affecting central nervous system in diseases classified elsewhere) +131020-0.0 Source of report of G14 (postpolio syndrome) +131022-0.0 Source of report of G20 (parkinson's disease) +131024-0.0 Source of report of G21 (secondary parkinsonism) +131026-0.0 Source of report of G22 (parkinsonism in diseases classified elsewhere) +131028-0.0 Source of report of G23 (other degenerative diseases of basal ganglia) +131030-0.0 Source of report of G24 (dystonia) +131032-0.0 Source of report of G25 (other extrapyramidal and movement disorders) +131036-0.0 Source of report of G30 (alzheimer's disease) +131038-0.0 "Source of report of G31 (other degenerative diseases of nervous system, not elsewhere classified)" +131040-0.0 Source of report of G32 (other degenerative disorders of nervous system in diseases classified elsewhere) +131042-0.0 Source of report of G35 (multiple sclerosis) +131044-0.0 Source of report of G36 (other acute disseminated demyelination) +131046-0.0 Source of report of G37 (other demyelinating diseases of central nervous system) +131048-0.0 Source of report of G40 (epilepsy) +131050-0.0 Source of report of G41 (status epilepticus) +131052-0.0 Source of report of G43 (migraine) +131054-0.0 Source of report of G44 (other headache syndromes) +131056-0.0 Source of report of G45 (transient cerebral ischaemic attacks and related syndromes) +131058-0.0 Source of report of G46 (vascular syndromes of brain in cerebrovascular diseases) +131060-0.0 Source of report of G47 (sleep disorders) +131062-0.0 Source of report of G50 (disorders of trigeminal nerve) +131064-0.0 Source of report of G51 (facial nerve disorders) +131066-0.0 Source of report of G52 (disorders of other cranial nerves) +131068-0.0 Source of report of G53 (cranial nerve disorders in diseases classified elsewhere) +131070-0.0 Source of report of G54 (nerve root and plexus disorders) +131072-0.0 Source of report of G55 (nerve root and plexus compressions in diseases classified elsewhere) +131074-0.0 Source of report of G56 (mononeuropathies of upper limb) +131076-0.0 Source of report of G57 (mononeuropathies of lower limb) +131078-0.0 Source of report of G58 (other mononeuropathies) +131080-0.0 Source of report of G59 (mononeuropathy in diseases classified elsewhere) +131082-0.0 Source of report of G60 (hereditary and idiopathic neuropathy) +131084-0.0 Source of report of G61 (inflammatory polyneuropathy) +131086-0.0 Source of report of G62 (other polyneuropathies) +131088-0.0 Source of report of G63 (polyneuropathy in diseases classified elsewhere) +131090-0.0 Source of report of G64 (other disorders of peripheral nervous system) +131092-0.0 Source of report of G70 (myasthenia gravis and other myoneural disorders) +131094-0.0 Source of report of G71 (primary disorders of muscles) +131096-0.0 Source of report of G72 (other myopathies) +131098-0.0 Source of report of G73 (disorders of myoneural junction and muscle in diseases classified elsewhere) +131100-0.0 Source of report of G80 (infantile cerebral palsy) +131102-0.0 Source of report of G81 (hemiplegia) +131104-0.0 Source of report of G82 (paraplegia and tetraplegia) +131106-0.0 Source of report of G83 (other paralytic syndromes) +131108-0.0 Source of report of G90 (disorders of autonomic nervous system) +131110-0.0 Source of report of G91 (hydrocephalus) +131112-0.0 Source of report of G92 (toxic encephalopathy) +131114-0.0 Source of report of G93 (other disorders of brain) +131116-0.0 Source of report of G94 (other disorders of brain in diseases classified elsewhere) +131118-0.0 Source of report of G95 (other diseases of spinal cord) +131120-0.0 Source of report of G96 (other disorders of central nervous system) +131122-0.0 "Source of report of G97 (postprocedural disorders of nervous system, not elsewhere classified)" +131124-0.0 "Source of report of G98 (other disorders of nervous system, not elsewhere classified)" +131126-0.0 Source of report of G99 (other disorders of nervous system in diseases classified elsewhere) +131128-0.0 Source of report of H00 (hordeolum and chalazion) +131130-0.0 Source of report of H01 (other inflammation of eyelid) +131132-0.0 Source of report of H02 (other disorders of eyelid) +131134-0.0 Source of report of H03 (disorders of eyelid in diseases classified elsewhere) +131136-0.0 Source of report of H04 (disorders of lachrymal system) +131138-0.0 Source of report of H05 (disorders of orbit) +131140-0.0 Source of report of H06 (disorders of lachrymal system and orbit in diseases classified elsewhere) +131142-0.0 Source of report of H10 (conjunctivitis) +131144-0.0 Source of report of H11 (other disorders of conjunctiva) +131146-0.0 Source of report of H13 (disorders of conjunctiva in diseases classified elsewhere) +131148-0.0 Source of report of H15 (disorders of sclera) +131150-0.0 Source of report of H16 (keratitis) +131152-0.0 Source of report of H17 (corneal scars and opacities) +131154-0.0 Source of report of H18 (other disorders of cornea) +131156-0.0 Source of report of H19 (disorders of sclera and cornea in diseases classified elsewhere) +131158-0.0 Source of report of H20 (iridocyclitis) +131160-0.0 Source of report of H21 (other disorders of iris and ciliary body) +131162-0.0 Source of report of H22 (disorders of iris and ciliary body in diseases classified elsewhere) +131164-0.0 Source of report of H25 (senile cataract) +131166-0.0 Source of report of H26 (other cataract) +131168-0.0 Source of report of H27 (other disorders of lens) +131170-0.0 Source of report of H28 (cataract and other disorders of lens in diseases classified elsewhere) +131172-0.0 Source of report of H30 (chorioretinal inflammation) +131174-0.0 Source of report of H31 (other disorders of choroid) +131176-0.0 Source of report of H32 (chorioretinal disorders in diseases classified elsewhere) +131178-0.0 Source of report of H33 (retinal detachments and breaks) +131180-0.0 Source of report of H34 (retinal vascular occlusions) +131182-0.0 Source of report of H35 (other retinal disorders) +131184-0.0 Source of report of H36 (retinal disorders in diseases classified elsewhere) +131186-0.0 Source of report of H40 (glaucoma) +131188-0.0 Source of report of H42 (glaucoma in diseases classified elsewhere) +131190-0.0 Source of report of H43 (disorders of vitreous body) +131192-0.0 Source of report of H44 (disorders of globe) +131194-0.0 Source of report of H45 (disorders of vitreous body and globe in diseases classified elsewhere) +131196-0.0 Source of report of H46 (optic neuritis) +131198-0.0 Source of report of H47 (other disorders of optic [2nd] nerve and visual pathways) +131200-0.0 Source of report of H48 (disorders of optic [2nd] nerve and visual pathways in diseases classified elsewhere) +131202-0.0 Source of report of H49 (paralytic strabismus) +131204-0.0 Source of report of H50 (other strabismus) +131206-0.0 Source of report of H51 (other disorders of binocular movement) +131208-0.0 Source of report of H52 (disorders of refraction and accommodation) +131210-0.0 Source of report of H53 (visual disturbances) +131212-0.0 Source of report of H54 (blindness and low vision) +131214-0.0 Source of report of H55 (nystagmus and other irregular eye movements) +131216-0.0 Source of report of H57 (other disorders of eye and adnexa) +131218-0.0 Source of report of H58 (other disorders of eye and adnexa in diseases classified elsewhere) +131220-0.0 "Source of report of H59 (postprocedural disorders of eye and adnexa, not elsewhere classified)" +131222-0.0 Source of report of H60 (otitis externa) +131224-0.0 Source of report of H61 (other disorders of external ear) +131226-0.0 Source of report of H62 (disorders of external ear in diseases classified elsewhere) +131228-0.0 Source of report of H65 (nonsuppurative otitis media) +131230-0.0 Source of report of H66 (suppurative and unspecified otitis media) +131232-0.0 Source of report of H67 (otitis media in diseases classified elsewhere) +131234-0.0 Source of report of H68 (eustachian salpingitis and obstruction) +131236-0.0 Source of report of H69 (other disorders of eustachian tube) +131238-0.0 Source of report of H70 (mastoiditis and related conditions) +131240-0.0 Source of report of H71 (cholesteatoma of middle ear) +131242-0.0 Source of report of H72 (perforation of tympanic membrane) +131244-0.0 Source of report of H73 (other disorders of tympanic membrane) +131246-0.0 Source of report of H74 (other disorders of middle ear and mastoid) +131248-0.0 Source of report of H75 (other disorders of middle ear and mastoid in diseases classified elsewhere) +131250-0.0 Source of report of H80 (otosclerosis) +131252-0.0 Source of report of H81 (disorders of vestibular function) +131254-0.0 Source of report of H82 (vertiginous syndromes in diseases classified elsewhere) +131256-0.0 Source of report of H83 (other diseases of inner ear) +131258-0.0 Source of report of H90 (conductive and sensorineural hearing loss) +131260-0.0 Source of report of H91 (other hearing loss) +131262-0.0 Source of report of H92 (otalgia and effusion of ear) +131264-0.0 "Source of report of H93 (other disorders of ear, not elsewhere classified)" +131266-0.0 Source of report of H94 (other disorders of ear in diseases classified elsewhere) +131268-0.0 "Source of report of H95 (postprocedural disorders of ear and mastoid process, not elsewhere classified)" +131270-0.0 Source of report of I00 (rheumatic fever without mention of heart involvement) +131272-0.0 Source of report of I01 (rheumatic fever with heart involvement) +131274-0.0 Source of report of I02 (rheumatic chorea) +131276-0.0 Source of report of I05 (rheumatic mitral valve diseases) +131278-0.0 Source of report of I06 (rheumatic aortic valve diseases) +131280-0.0 Source of report of I07 (rheumatic tricuspid valve diseases) +131282-0.0 Source of report of I08 (multiple valve diseases) +131284-0.0 Source of report of I09 (other rheumatic heart diseases) +131286-0.0 Source of report of I10 (essential (primary) hypertension) +131288-0.0 Source of report of I11 (hypertensive heart disease) +131290-0.0 Source of report of I12 (hypertensive renal disease) +131292-0.0 Source of report of I13 (hypertensive heart and renal disease) +131294-0.0 Source of report of I15 (secondary hypertension) +131296-0.0 Source of report of I20 (angina pectoris) +131298-0.0 Source of report of I21 (acute myocardial infarction) +131300-0.0 Source of report of I22 (subsequent myocardial infarction) +131302-0.0 Source of report of I23 (certain current complications following acute myocardial infarction) +131304-0.0 Source of report of I24 (other acute ischaemic heart diseases) +131306-0.0 Source of report of I25 (chronic ischaemic heart disease) +131308-0.0 Source of report of I26 (pulmonary embolism) +131310-0.0 Source of report of I27 (other pulmonary heart diseases) +131312-0.0 Source of report of I28 (other diseases of pulmonary vessels) +131314-0.0 Source of report of I30 (acute pericarditis) +131316-0.0 Source of report of I31 (other diseases of pericardium) +131318-0.0 Source of report of I32 (pericarditis in diseases classified elsewhere) +131320-0.0 Source of report of I33 (acute and subacute endocarditis) +131322-0.0 Source of report of I34 (nonrheumatic mitral valve disorders) +131324-0.0 Source of report of I35 (nonrheumatic aortic valve disorders) +131326-0.0 Source of report of I36 (nonrheumatic tricuspid valve disorders) +131328-0.0 Source of report of I37 (pulmonary valve disorders) +131330-0.0 "Source of report of I38 (endocarditis, valve unspecified)" +131332-0.0 Source of report of I39 (endocarditis and heart valve disorders in diseases classified elsewhere) +131334-0.0 Source of report of I40 (acute myocarditis) +131336-0.0 Source of report of I41 (myocarditis in diseases classified elsewhere) +131338-0.0 Source of report of I42 (cardiomyopathy) +131340-0.0 Source of report of I43 (cardiomyopathy in diseases classified elsewhere) +131342-0.0 Source of report of I44 (atrioventricular and left bundle-branch block) +131344-0.0 Source of report of I45 (other conduction disorders) +131346-0.0 Source of report of I46 (cardiac arrest) +131348-0.0 Source of report of I47 (paroxysmal tachycardia) +131350-0.0 Source of report of I48 (atrial fibrillation and flutter) +131352-0.0 Source of report of I49 (other cardiac arrhythmias) +131354-0.0 Source of report of I50 (heart failure) +131356-0.0 Source of report of I51 (complications and ill-defined descriptions of heart disease) +131358-0.0 Source of report of I52 (other heart disorders in diseases classified elsewhere) +131360-0.0 Source of report of I60 (subarachnoid haemorrhage) +131362-0.0 Source of report of I61 (intracerebral haemorrhage) +131364-0.0 Source of report of I62 (other nontraumatic intracranial haemorrhage) +131366-0.0 Source of report of I63 (cerebral infarction) +131368-0.0 "Source of report of I64 (stroke, not specified as haemorrhage or infarction)" +131370-0.0 "Source of report of I65 (occlusion and stenosis of precerebral arteries, not resulting in cerebral infarction)" +131372-0.0 "Source of report of I66 (occlusion and stenosis of cerebral arteries, not resulting in cerebral infarction)" +131374-0.0 Source of report of I67 (other cerebrovascular diseases) +131376-0.0 Source of report of I68 (cerebrovascular disorders in diseases classified elsewhere) +131378-0.0 Source of report of I69 (sequelae of cerebrovascular disease) +131380-0.0 Source of report of I70 (atherosclerosis) +131382-0.0 Source of report of I71 (aortic aneurysm and dissection) +131384-0.0 Source of report of I72 (other aneurysm) +131386-0.0 Source of report of I73 (other peripheral vascular diseases) +131388-0.0 Source of report of I74 (arterial embolism and thrombosis) +131390-0.0 Source of report of I77 (other disorders of arteries and arterioles) +131392-0.0 Source of report of I78 (diseases of capillaries) +131394-0.0 "Source of report of I79 (disorders of arteries, arterioles and capillaries in diseases classified elsewhere)" +131396-0.0 Source of report of I80 (phlebitis and thrombophlebitis) +131398-0.0 Source of report of I81 (portal vein thrombosis) +131400-0.0 Source of report of I82 (other venous embolism and thrombosis) +131402-0.0 Source of report of I83 (varicose veins of lower extremities) +131404-0.0 Source of report of I84 (haemorrhoids) +131406-0.0 Source of report of I85 (oesophageal varices) +131408-0.0 Source of report of I86 (varicose veins of other sites) +131410-0.0 Source of report of I87 (other disorders of veins) +131412-0.0 Source of report of I88 (nonspecific lymphadenitis) +131414-0.0 Source of report of I89 (other non-infective disorders of lymphatic vessels and lymph nodes) +131416-0.0 Source of report of I95 (hypotension) +131418-0.0 "Source of report of I97 (postprocedural disorders of circulatory system, not elsewhere classified)" +131420-0.0 Source of report of I98 (other disorders of circulatory system in diseases classified elsewhere) +131422-0.0 Source of report of I99 (other and unspecified disorders of circulatory system) +131424-0.0 Source of report of J00 (acute nasopharyngitis [common cold]) +131426-0.0 Source of report of J01 (acute sinusitis) +131428-0.0 Source of report of J02 (acute pharyngitis) +131430-0.0 Source of report of J03 (acute tonsillitis) +131432-0.0 Source of report of J04 (acute laryngitis and tracheitis) +131434-0.0 Source of report of J05 (acute obstructive laryngitis [croup] and epiglottitis) +131436-0.0 Source of report of J06 (acute upper respiratory infections of multiple and unspecified sites) +131438-0.0 Source of report of J09 (influenza due to certain identified influenza virus) +131440-0.0 Source of report of J10 (influenza due to identified influenza virus) +131442-0.0 "Source of report of J11 (influenza, virus not identified)" +131444-0.0 "Source of report of J12 (viral pneumonia, not elsewhere classified)" +131446-0.0 Source of report of J13 (pneumonia due to streptococcus pneumoniae) +131448-0.0 Source of report of J14 (pneumonia due to haemophilus influenzae) +131450-0.0 "Source of report of J15 (bacterial pneumonia, not elsewhere classified)" +131452-0.0 "Source of report of J16 (pneumonia due to other infectious organisms, not elsewhere classified)" +131454-0.0 Source of report of J17 (pneumonia in diseases classified elsewhere) +131456-0.0 "Source of report of J18 (pneumonia, organism unspecified)" +131458-0.0 Source of report of J20 (acute bronchitis) +131460-0.0 Source of report of J21 (acute bronchiolitis) +131462-0.0 Source of report of J22 (unspecified acute lower respiratory infection) +131464-0.0 Source of report of J30 (vasomotor and allergic rhinitis) +131466-0.0 "Source of report of J31 (chronic rhinitis, nasopharyngitis and pharyngitis)" +131468-0.0 Source of report of J32 (chronic sinusitis) +131470-0.0 Source of report of J33 (nasal polyp) +131472-0.0 Source of report of J34 (other disorders of nose and nasal sinuses) +131474-0.0 Source of report of J35 (chronic diseases of tonsils and adenoids) +131476-0.0 Source of report of J36 (peritonsillar abscess) +131478-0.0 Source of report of J37 (chronic laryngitis and laryngotracheitis) +131480-0.0 "Source of report of J38 (diseases of vocal cords and larynx, not elsewhere classified)" +131482-0.0 Source of report of J39 (other diseases of upper respiratory tract) +131484-0.0 "Source of report of J40 (bronchitis, not specified as acute or chronic)" +131486-0.0 Source of report of J41 (simple and mucopurulent chronic bronchitis) +131488-0.0 Source of report of J42 (unspecified chronic bronchitis) +131490-0.0 Source of report of J43 (emphysema) +131492-0.0 Source of report of J44 (other chronic obstructive pulmonary disease) +131494-0.0 Source of report of J45 (asthma) +131496-0.0 Source of report of J46 (status asthmaticus) +131498-0.0 Source of report of J47 (bronchiectasis) +131500-0.0 Source of report of J60 (coalworker's pneumoconiosis) +131502-0.0 Source of report of J61 (pneumoconiosis due to asbestos and other mineral fibres) +131504-0.0 Source of report of J62 (pneumoconiosis due to dust containing silica) +131506-0.0 Source of report of J63 (pneumoconiosis due to other inorganic dusts) +131508-0.0 Source of report of J64 (unspecified pneumoconiosis) +131512-0.0 Source of report of J66 (airway disease due to specific organic dust) +131514-0.0 Source of report of J67 (hypersensitivity pneumonitis due to organic dust) +131516-0.0 "Source of report of J68 (respiratory conditions due to inhalation of chemicals, gases, fumes and vapours)" +131518-0.0 Source of report of J69 (pneumonitis due to solids and liquids) +131520-0.0 Source of report of J70 (respiratory conditions due to other external agents) +131522-0.0 Source of report of J80 (adult respiratory distress syndrome) +131524-0.0 Source of report of J81 (pulmonary oedema) +131526-0.0 "Source of report of J82 (pulmonary eosinophilia, not elsewhere classified)" +131528-0.0 Source of report of J84 (other interstitial pulmonary diseases) +131530-0.0 Source of report of J85 (abscess of lung and mediastinum) +131532-0.0 Source of report of J86 (pyothorax) +131534-0.0 "Source of report of J90 (pleural effusion, not elsewhere classified)" +131536-0.0 Source of report of J91 (pleural effusion in conditions classified elsewhere) +131538-0.0 Source of report of J92 (pleural plaque) +131540-0.0 Source of report of J93 (pneumothorax) +131542-0.0 Source of report of J94 (other pleural conditions) +131544-0.0 "Source of report of J95 (postprocedural respiratory disorders, not elsewhere classified)" +131546-0.0 "Source of report of J96 (respiratory failure, not elsewhere classified)" +131548-0.0 Source of report of J98 (other respiratory disorders) +131550-0.0 Source of report of J99 (respiratory disorders in diseases classified elsewhere) +131552-0.0 Source of report of K00 (disorders of tooth development and eruption) +131554-0.0 Source of report of K01 (embedded and impacted teeth) +131556-0.0 Source of report of K02 (dental caries) +131558-0.0 Source of report of K03 (other diseases of hard tissues of teeth) +131560-0.0 Source of report of K04 (diseases of pulp and periapical tissues) +131562-0.0 Source of report of K05 (gingivitis and periodontal diseases) +131564-0.0 Source of report of K06 (other disorders of gingiva and edentulous alveolar ridge) +131566-0.0 Source of report of K07 (dentofacial anomalies [including malocclusion]) +131568-0.0 Source of report of K08 (other disorders of teeth and supporting structures) +131570-0.0 "Source of report of K09 (cysts of oral region, not elsewhere classified)" +131572-0.0 Source of report of K10 (other diseases of jaws) +131574-0.0 Source of report of K11 (diseases of salivary glands) +131576-0.0 Source of report of K12 (stomatitis and related lesions) +131578-0.0 Source of report of K13 (other diseases of lip and oral mucosa) +131580-0.0 Source of report of K14 (diseases of tongue) +131582-0.0 Source of report of K20 (oesophagitis) +131584-0.0 Source of report of K21 (gastro-oesophageal reflux disease) +131586-0.0 Source of report of K22 (other diseases of oesophagus) +131588-0.0 Source of report of K23 (disorders of oesophagus in diseases classified elsewhere) +131590-0.0 Source of report of K25 (gastric ulcer) +131592-0.0 Source of report of K26 (duodenal ulcer) +131594-0.0 "Source of report of K27 (peptic ulcer, site unspecified)" +131596-0.0 Source of report of K28 (gastrojejunal ulcer) +131598-0.0 Source of report of K29 (gastritis and duodenitis) +131600-0.0 Source of report of K30 (dyspepsia) +131602-0.0 Source of report of K31 (other diseases of stomach and duodenum) +131604-0.0 Source of report of K35 (acute appendicitis) +131606-0.0 Source of report of K36 (other appendicitis) +131608-0.0 Source of report of K37 (unspecified appendicitis) +131610-0.0 Source of report of K38 (other diseases of appendix) +131612-0.0 Source of report of K40 (inguinal hernia) +131614-0.0 Source of report of K41 (femoral hernia) +131616-0.0 Source of report of K42 (umbilical hernia) +131618-0.0 Source of report of K43 (ventral hernia) +131620-0.0 Source of report of K44 (diaphragmatic hernia) +131622-0.0 Source of report of K45 (other abdominal hernia) +131624-0.0 Source of report of K46 (unspecified abdominal hernia) +131626-0.0 Source of report of K50 (crohn's disease [regional enteritis]) +131628-0.0 Source of report of K51 (ulcerative colitis) +131630-0.0 Source of report of K52 (other non-infective gastro-enteritis and colitis) +131632-0.0 Source of report of K55 (vascular disorders of intestine) +131634-0.0 Source of report of K56 (paralytic ileus and intestinal obstruction without hernia) +131636-0.0 Source of report of K57 (diverticular disease of intestine) +131638-0.0 Source of report of K58 (irritable bowel syndrome) +131640-0.0 Source of report of K59 (other functional intestinal disorders) +131642-0.0 Source of report of K60 (fissure and fistula of anal and rectal regions) +131644-0.0 Source of report of K61 (abscess of anal and rectal regions) +131646-0.0 Source of report of K62 (other diseases of anus and rectum) +131648-0.0 Source of report of K63 (other diseases of intestine) +131650-0.0 Source of report of K64 (haemorrhoids and perianal venous thrombosis) +131652-0.0 Source of report of K65 (peritonitis) +131654-0.0 Source of report of K66 (other disorders of peritoneum) +131656-0.0 Source of report of K67 (disorders of peritoneum in infectious diseases classified elsewhere) +131658-0.0 Source of report of K70 (alcoholic liver disease) +131660-0.0 Source of report of K71 (toxic liver disease) +131662-0.0 "Source of report of K72 (hepatic failure, not elsewhere classified)" +131664-0.0 "Source of report of K73 (chronic hepatitis, not elsewhere classified)" +131666-0.0 Source of report of K74 (fibrosis and cirrhosis of liver) +131668-0.0 Source of report of K75 (other inflammatory liver diseases) +131670-0.0 Source of report of K76 (other diseases of liver) +131672-0.0 Source of report of K77 (liver disorders in diseases classified elsewhere) +131674-0.0 Source of report of K80 (cholelithiasis) +131676-0.0 Source of report of K81 (cholecystitis) +131678-0.0 Source of report of K82 (other diseases of gallbladder) +131680-0.0 Source of report of K83 (other diseases of biliary tract) +131682-0.0 Source of report of K85 (acute pancreatitis) +131684-0.0 Source of report of K86 (other diseases of pancreas) +131686-0.0 "Source of report of K87 (disorders of gallbladder, biliary tract and pancreas in diseases classified elsewhere)" +131688-0.0 Source of report of K90 (intestinal malabsorption) +131690-0.0 "Source of report of K91 (postprocedural disorders of digestive system, not elsewhere classified)" +131692-0.0 Source of report of K92 (other diseases of digestive system) +131694-0.0 Source of report of K93 (disorders of other digestive organs in diseases classified elsewhere) +131696-0.0 Source of report of L00 (staphylococcal scalded skin syndrome) +131698-0.0 Source of report of L01 (impetigo) +131700-0.0 "Source of report of L02 (cutaneous abscess, furuncle and carbuncle)" +131702-0.0 Source of report of L03 (cellulitis) +131704-0.0 Source of report of L04 (acute lymphadenitis) +131706-0.0 Source of report of L05 (pilonidal cyst) +131708-0.0 Source of report of L08 (other local infections of skin and subcutaneous tissue) +131710-0.0 Source of report of L10 (pemphigus) +131712-0.0 Source of report of L11 (other acantholytic disorders) +131714-0.0 Source of report of L12 (pemphigoid) +131716-0.0 Source of report of L13 (other bullous disorders) +131718-0.0 Source of report of L14 (bullous disorders in diseases classified elsewhere) +131720-0.0 Source of report of L20 (atopic dermatitis) +131722-0.0 Source of report of L21 (seborrhoeic dermatitis) +131724-0.0 Source of report of L22 (diaper [napkin] dermatitis) +131726-0.0 Source of report of L23 (allergic contact dermatitis) +131728-0.0 Source of report of L24 (irritant contact dermatitis) +131730-0.0 Source of report of L25 (unspecified contact dermatitis) +131732-0.0 Source of report of L26 (exfoliative dermatitis) +131734-0.0 Source of report of L27 (dermatitis due to substances taken internally) +131736-0.0 Source of report of L28 (lichen simplex chronicus and prurigo) +131738-0.0 Source of report of L29 (pruritus) +131740-0.0 Source of report of L30 (other dermatitis) +131742-0.0 Source of report of L40 (psoriasis) +131744-0.0 Source of report of L41 (parapsoriasis) +131746-0.0 Source of report of L42 (pityriasis rosea) +131748-0.0 Source of report of L43 (lichen planus) +131750-0.0 Source of report of L44 (other papulosquamous disorders) +131754-0.0 Source of report of L50 (urticaria) +131756-0.0 Source of report of L51 (erythema multiforme) +131758-0.0 Source of report of L52 (erythema nodosum) +131760-0.0 Source of report of L53 (other erythematous conditions) +131762-0.0 Source of report of L54 (erythema in diseases classified elsewhere) +131764-0.0 Source of report of L55 (sunburn) +131766-0.0 Source of report of L56 (other acute skin changes due to ultraviolet radiation) +131768-0.0 Source of report of L57 (skin changes due to chronic exposure to nonionising radiation) +131770-0.0 Source of report of L58 (radiodermatitis) +131772-0.0 Source of report of L59 (other disorders of skin and subcutaneous tissue related to radiation) +131774-0.0 Source of report of L60 (nail disorders) +131776-0.0 Source of report of L62 (nail disorders in diseases classified elsewhere) +131778-0.0 Source of report of L63 (alopecia areata) +131780-0.0 Source of report of L64 (androgenic alopecia) +131782-0.0 Source of report of L65 (other nonscarring hair loss) +131784-0.0 Source of report of L66 (cicatricial alopecia [scarring hair loss]) +131786-0.0 Source of report of L67 (hair colour and hair shaft abnormalities) +131788-0.0 Source of report of L68 (hypertrichosis) +131790-0.0 Source of report of L70 (acne) +131792-0.0 Source of report of L71 (rosacea) +131794-0.0 Source of report of L72 (follicular cysts of skin and subcutaneous tissue) +131796-0.0 Source of report of L73 (other follicular disorders) +131798-0.0 Source of report of L74 (eccrine sweat disorders) +131800-0.0 Source of report of L75 (apocrine sweat disorders) +131802-0.0 Source of report of L80 (vitiligo) +131804-0.0 Source of report of L81 (other disorders of pigmentation) +131806-0.0 Source of report of L82 (seborrhoeic keratosis) +131808-0.0 Source of report of L83 (acanthosis nigricans) +131810-0.0 Source of report of L84 (corns and callosities) +131812-0.0 Source of report of L85 (other epidermal thickening) +131814-0.0 Source of report of L86 (keratoderma in diseases classified elsewhere) +131816-0.0 Source of report of L87 (transepidermal elimination disorders) +131818-0.0 Source of report of L88 (pyoderma gangrenosum) +131820-0.0 Source of report of L89 (decubitus ulcer) +131822-0.0 Source of report of L90 (atrophic disorders of skin) +131824-0.0 Source of report of L91 (hypertrophic disorders of skin) +131826-0.0 Source of report of L92 (granulomatous disorders of skin and subcutaneous tissue) +131828-0.0 Source of report of L93 (lupus erythematosus) +131830-0.0 Source of report of L94 (other localised connective tissue disorders) +131832-0.0 "Source of report of L95 (vasculitis limited to skin, not elsewhere classified)" +131834-0.0 "Source of report of L97 (ulcer of lower limb, not elsewhere classified)" +131836-0.0 "Source of report of L98 (other disorders of skin and subcutaneous tissue, not elsewhere classified)" +131838-0.0 Source of report of L99 (other disorders of skin and subcutaneous tissue in diseases classified elsewhere) +131840-0.0 Source of report of M00 (pyogenic arthritis) +131842-0.0 Source of report of M01 (direct infections of joint in infectious and parasitic diseases classified elsewhere) +131844-0.0 Source of report of M02 (reactive arthropathies) +131846-0.0 Source of report of M03 (postinfective and reactive arthropathies in diseases classified elsewhere) +131848-0.0 Source of report of M05 (seropositive rheumatoid arthritis) +131850-0.0 Source of report of M06 (other rheumatoid arthritis) +131852-0.0 Source of report of M07 (psoriatic and enteropathic arthropathies) +131854-0.0 Source of report of M08 (juvenile arthritis) +131856-0.0 Source of report of M09 (juvenile arthritis in diseases classified elsewhere) +131858-0.0 Source of report of M10 (gout) +131860-0.0 Source of report of M11 (other crystal arthropathies) +131862-0.0 Source of report of M12 (other specific arthropathies) +131864-0.0 Source of report of M13 (other arthritis) +131866-0.0 Source of report of M14 (arthropathies in other diseases classified elsewhere) +131868-0.0 Source of report of M15 (polyarthrosis) +131870-0.0 Source of report of M16 (coxarthrosis [arthrosis of hip]) +131872-0.0 Source of report of M17 (gonarthrosis [arthrosis of knee]) +131874-0.0 Source of report of M18 (arthrosis of first carpometacarpal joint) +131876-0.0 Source of report of M19 (other arthrosis) +131878-0.0 Source of report of M20 (acquired deformities of fingers and toes) +131880-0.0 Source of report of M21 (other acquired deformities of limbs) +131882-0.0 Source of report of M22 (disorders of patella) +131884-0.0 Source of report of M23 (internal derangement of knee) +131886-0.0 Source of report of M24 (other specific joint derangements) +131888-0.0 "Source of report of M25 (other joint disorders, not elsewhere classified)" +131890-0.0 Source of report of M30 (polyarteritis nodosa and related conditions) +131892-0.0 Source of report of M31 (other necrotising vasculopathies) +131894-0.0 Source of report of M32 (systemic lupus erythematosus) +131896-0.0 Source of report of M33 (dermatopolymyositis) +131898-0.0 Source of report of M34 (systemic sclerosis) +131900-0.0 Source of report of M35 (other systemic involvement of connective tissue) +131902-0.0 Source of report of M36 (systemic disorders of connective tissue in diseases classified elsewhere) +131904-0.0 Source of report of M40 (kyphosis and lordosis) +131906-0.0 Source of report of M41 (scoliosis) +131908-0.0 Source of report of M42 (spinal osteochondrosis) +131910-0.0 Source of report of M43 (other deforming dorsopathies) +131912-0.0 Source of report of M45 (ankylosing spondylitis) +131914-0.0 Source of report of M46 (other inflammatory spondylopathies) +131916-0.0 Source of report of M47 (spondylosis) +131918-0.0 Source of report of M48 (other spondylopathies) +131920-0.0 Source of report of M49 (spondylopathies in diseases classified elsewhere) +131922-0.0 Source of report of M50 (cervical disk disorders) +131924-0.0 Source of report of M51 (other intervertebral disk disorders) +131926-0.0 "Source of report of M53 (other dorsopathies, not elsewhere classified)" +131928-0.0 Source of report of M54 (dorsalgia) +131930-0.0 Source of report of M60 (myositis) +131932-0.0 Source of report of M61 (calcification and ossification of muscle) +131934-0.0 Source of report of M62 (other disorders of muscle) +131936-0.0 Source of report of M63 (disorders of muscle in diseases classified elsewhere) +131938-0.0 Source of report of M65 (synovitis and tenosynovitis) +131940-0.0 Source of report of M66 (spontaneous rupture of synovium and tendon) +131942-0.0 Source of report of M67 (other disorders of synovium and tendon) +131944-0.0 Source of report of M68 (disorders of synovium and tendon in diseases classified elsewhere) +131946-0.0 "Source of report of M70 (soft tissue disorders related to use, overuse and pressure)" +131948-0.0 Source of report of M71 (other bursopathies) +131950-0.0 Source of report of M72 (fibroblastic disorders) +131952-0.0 Source of report of M73 (soft tissue disorders in diseases classified elsewhere) +131954-0.0 Source of report of M75 (shoulder lesions) +131956-0.0 "Source of report of M76 (enthesopathies of lower limb, excluding foot)" +131958-0.0 Source of report of M77 (other enthesopathies) +131960-0.0 "Source of report of M79 (other soft tissue disorders, not elsewhere classified)" +131962-0.0 Source of report of M80 (osteoporosis with pathological fracture) +131964-0.0 Source of report of M81 (osteoporosis without pathological fracture) +131966-0.0 Source of report of M82 (osteoporosis in diseases classified elsewhere) +131968-0.0 Source of report of M83 (adult osteomalacia) +131970-0.0 Source of report of M84 (disorders of continuity of bone) +131972-0.0 Source of report of M85 (other disorders of bone density and structure) +131974-0.0 Source of report of M86 (osteomyelitis) +131976-0.0 Source of report of M87 (osteonecrosis) +131978-0.0 Source of report of M88 (paget's disease of bone [osteitis deformans]) +131980-0.0 Source of report of M89 (other disorders of bone) +131982-0.0 Source of report of M90 (osteopathies in diseases classified elsewhere) +131984-0.0 Source of report of M91 (juvenile osteochondrosis of hip and pelvis) +131986-0.0 Source of report of M92 (other juvenile osteochondrosis) +131988-0.0 Source of report of M93 (other osteochondropathies) +131990-0.0 Source of report of M94 (other disorders of cartilage) +131992-0.0 Source of report of M95 (other acquired deformities of musculoskeletal system and connective tissue) +131994-0.0 "Source of report of M96 (postprocedural musculoskeletal disorders, not elsewhere classified)" +131996-0.0 "Source of report of M99 (biomechanical lesions, not elsewhere classified)" +131998-0.0 Source of report of N00 (acute nephritic syndrome) +132000-0.0 Source of report of N01 (rapidly progressive nephritic syndrome) +132002-0.0 Source of report of N02 (recurrent and persistent haematuria) +132004-0.0 Source of report of N03 (chronic nephritic syndrome) +132006-0.0 Source of report of N04 (nephrotic syndrome) +132008-0.0 Source of report of N05 (unspecified nephritic syndrome) +132010-0.0 Source of report of N06 (isolated proteinuria with specified morphological lesion) +132012-0.0 "Source of report of N07 (hereditary nephropathy, not elsewhere classified)" +132014-0.0 Source of report of N08 (glomerular disorders in diseases classified elsewhere) +132016-0.0 Source of report of N10 (acute tubulo-interstitial nephritis) +132018-0.0 Source of report of N11 (chronic tubulo-interstitial nephritis) +132020-0.0 "Source of report of N12 (tubulo-interstitial nephritis, not specified as acute or chronic)" +132022-0.0 Source of report of N13 (obstructive and reflux uropathy) +132024-0.0 Source of report of N14 (drug- and heavy-metal-induced tubulo-interstitial and tubular conditions) +132026-0.0 Source of report of N15 (other renal tubulo-interstitial diseases) +132028-0.0 Source of report of N16 (renal tubulo-interstitial disorders in diseases classified elsewhere) +132030-0.0 Source of report of N17 (acute renal failure) +132032-0.0 Source of report of N18 (chronic renal failure) +132034-0.0 Source of report of N19 (unspecified renal failure) +132036-0.0 Source of report of N20 (calculus of kidney and ureter) +132038-0.0 Source of report of N21 (calculus of lower urinary tract) +132040-0.0 Source of report of N22 (calculus of urinary tract in diseases classified elsewhere) +132042-0.0 Source of report of N23 (unspecified renal colic) +132044-0.0 Source of report of N25 (disorders resulting from impaired renal tubular function) +132046-0.0 Source of report of N26 (unspecified contracted kidney) +132048-0.0 Source of report of N27 (small kidney of unknown cause) +132050-0.0 "Source of report of N28 (other disorders of kidney and ureter, not elsewhere classified)" +132052-0.0 Source of report of N29 (other disorders of kidney and ureter in diseases classified elsewhere) +132054-0.0 Source of report of N30 (cystitis) +132056-0.0 "Source of report of N31 (neuromuscular dysfunction of bladder, not elsewhere classified)" +132058-0.0 Source of report of N32 (other disorders of bladder) +132060-0.0 Source of report of N33 (bladder disorders in diseases classified elsewhere) +132062-0.0 Source of report of N34 (urethritis and urethral syndrome) +132064-0.0 Source of report of N35 (urethral stricture) +132066-0.0 Source of report of N36 (other disorders of urethra) +132068-0.0 Source of report of N37 (urethral disorders in diseases classified elsewhere) +132070-0.0 Source of report of N39 (other disorders of urinary system) +132072-0.0 Source of report of N40 (hyperplasia of prostate) +132074-0.0 Source of report of N41 (inflammatory diseases of prostate) +132076-0.0 Source of report of N42 (other disorders of prostate) +132078-0.0 Source of report of N43 (hydrocele and spermatocele) +132080-0.0 Source of report of N44 (torsion of testis) +132082-0.0 Source of report of N45 (orchitis and epididymitis) +132084-0.0 Source of report of N46 (male infertility) +132086-0.0 "Source of report of N47 (redundant prepuce, phimosis and paraphimosis)" +132088-0.0 Source of report of N48 (other disorders of penis) +132090-0.0 "Source of report of N49 (inflammatory disorders of male genital organs, not elsewhere classified)" +132092-0.0 Source of report of N50 (other disorders of male genital organs) +132094-0.0 Source of report of N51 (disorders of male genital organs in diseases classified elsewhere) +132096-0.0 Source of report of N60 (benign mammary dysplasia) +132098-0.0 Source of report of N61 (inflammatory disorders of breast) +132100-0.0 Source of report of N62 (hypertrophy of breast) +132102-0.0 Source of report of N63 (unspecified lump in breast) +132104-0.0 Source of report of N64 (other disorders of breast) +132106-0.0 Source of report of N70 (salpingitis and oophoritis) +132108-0.0 "Source of report of N71 (inflammatory disease of uterus, except cervix)" +132110-0.0 Source of report of N72 (inflammatory disease of cervix uteri) +132112-0.0 Source of report of N73 (other female pelvic inflammatory diseases) +132114-0.0 Source of report of N74 (female pelvic inflammatory disorders in diseases classified elsewhere) +132116-0.0 Source of report of N75 (diseases of bartholin's gland) +132118-0.0 Source of report of N76 (other inflammation of vagina and vulva) +132120-0.0 Source of report of N77 (vulvovaginal ulceration and inflammation in diseases classified elsewhere) +132122-0.0 Source of report of N80 (endometriosis) +132124-0.0 Source of report of N81 (female genital prolapse) +132126-0.0 Source of report of N82 (fistulae involving female genital tract) +132128-0.0 "Source of report of N83 (noninflammatory disorders of ovary, fallopian tube and broad ligament)" +132130-0.0 Source of report of N84 (polyp of female genital tract) +132132-0.0 "Source of report of N85 (other noninflammatory disorders of uterus, except cervix)" +132134-0.0 Source of report of N86 (erosion and ectropion of cervix uteri) +132136-0.0 Source of report of N87 (dysplasia of cervix uteri) +132138-0.0 Source of report of N88 (other noninflammatory disorders of cervix uteri) +132140-0.0 Source of report of N89 (other noninflammatory disorders of vagina) +132142-0.0 Source of report of N90 (other noninflammatory disorders of vulva and perineum) +132144-0.0 "Source of report of N91 (absent, scanty and rare menstruation)" +132146-0.0 "Source of report of N92 (excessive, frequent and irregular menstruation)" +132148-0.0 Source of report of N93 (other abnormal uterine and vaginal bleeding) +132150-0.0 Source of report of N94 (pain and other conditions associated with female genital organs and menstrual cycle) +132152-0.0 Source of report of N95 (menopausal and other perimenopausal disorders) +132154-0.0 Source of report of N96 (habitual aborter) +132156-0.0 Source of report of N97 (female infertility) +132158-0.0 Source of report of N98 (complications associated with artificial fertilisation) +132160-0.0 "Source of report of N99 (postprocedural disorders of genito-urinary system, not elsewhere classified)" +132162-0.0 Source of report of O00 (ectopic pregnancy) +132164-0.0 Source of report of O01 (hydatidiform mole) +132166-0.0 Source of report of O02 (other abnormal products of conception) +132168-0.0 Source of report of O03 (spontaneous abortion) +132170-0.0 Source of report of O04 (medical abortion) +132172-0.0 Source of report of O05 (other abortion) +132174-0.0 Source of report of O06 (unspecified abortion) +132176-0.0 Source of report of O07 (failed attempted abortion) +132178-0.0 Source of report of O08 (complications following abortion and ectopic and molar pregnancy) +132180-0.0 "Source of report of O10 (pre-existing hypertension complicating pregnancy, childbirth and the puerperium)" +132182-0.0 Source of report of O11 (pre-existing hypertensive disorder with superimposed proteinuria) +132184-0.0 Source of report of O12 (gestational [pregnancy-induced] oedema and proteinuria without hypertension) +132186-0.0 Source of report of O13 (gestational [pregnancy-induced] hypertension without significant proteinuria) +132188-0.0 Source of report of O14 (gestational [pregnancy-induced] hypertension with significant proteinuria) +132190-0.0 Source of report of O15 (eclampsia) +132192-0.0 Source of report of O16 (unspecified maternal hypertension) +132194-0.0 Source of report of O20 (haemorrhage in early pregnancy) +132196-0.0 Source of report of O21 (excessive vomiting in pregnancy) +132198-0.0 Source of report of O22 (venous complications in pregnancy) +132200-0.0 Source of report of O23 (infections of genito-urinary tract in pregnancy) +132202-0.0 Source of report of O24 (diabetes mellitus in pregnancy) +132204-0.0 Source of report of O25 (malnutrition in pregnancy) +132206-0.0 Source of report of O26 (maternal care for other conditions predominantly related to pregnancy) +132208-0.0 Source of report of O28 (abnormal findings on antenatal screening of mother) +132210-0.0 Source of report of O29 (complications of anaesthesia during pregnancy) +132212-0.0 Source of report of O30 (multiple gestation) +132214-0.0 Source of report of O31 (complications specific to multiple gestation) +132216-0.0 Source of report of O32 (maternal care for known or suspected malpresentation of foetus) +132218-0.0 Source of report of O33 (maternal care for known or suspected disproportion) +132220-0.0 Source of report of O34 (maternal care for known or suspected abnormality of pelvic organs) +132222-0.0 Source of report of O35 (maternal care for known or suspected foetal abnormality and damage) +132224-0.0 Source of report of O36 (maternal care for other known or suspected foetal problems) +132226-0.0 Source of report of O40 (polyhydramnios) +132228-0.0 Source of report of O41 (other disorders of amniotic fluid and membranes) +132230-0.0 Source of report of O42 (premature rupture of membranes) +132232-0.0 Source of report of O43 (placental disorders) +132234-0.0 Source of report of O44 (placenta praevia) +132236-0.0 Source of report of O45 (premature separation of placenta [abruptio placentae]) +132238-0.0 "Source of report of O46 (antepartum haemorrhage, not elsewhere classified)" +132240-0.0 Source of report of O47 (false labour) +132242-0.0 Source of report of O48 (prolonged pregnancy) +132244-0.0 Source of report of O60 (preterm delivery) +132246-0.0 Source of report of O61 (failed induction of labour) +132248-0.0 Source of report of O62 (abnormalities of forces of labour) +132250-0.0 Source of report of O63 (long labour) +132252-0.0 Source of report of O64 (obstructed labour due to malposition and malpresentation of foetus) +132254-0.0 Source of report of O65 (obstructed labour due to maternal pelvic abnormality) +132256-0.0 Source of report of O66 (other obstructed labour) +132258-0.0 "Source of report of O67 (labour and delivery complicated by intrapartum haemorrhage, not elsewhere classified)" +132260-0.0 Source of report of O68 (labour and delivery complicated by foetal stress [distress]) +132262-0.0 Source of report of O69 (labour and delivery complicated by umbilical cord complications) +132264-0.0 Source of report of O70 (perineal laceration during delivery) +132266-0.0 Source of report of O71 (other obstetric trauma) +132268-0.0 Source of report of O72 (postpartum haemorrhage) +132270-0.0 "Source of report of O73 (retained placenta and membranes, without haemorrhage)" +132272-0.0 Source of report of O74 (complications of anaesthesia during labour and delivery) +132274-0.0 "Source of report of O75 (other complications of labour and delivery, not elsewhere classified)" +132276-0.0 Source of report of O80 (single spontaneous delivery) +132278-0.0 Source of report of O81 (single delivery by forceps and vacuum extractor) +132280-0.0 Source of report of O82 (single delivery by caesarean section) +132282-0.0 Source of report of O83 (other assisted single delivery) +132284-0.0 Source of report of O84 (multiple delivery) +132286-0.0 Source of report of O85 (puerperal sepsis) +132288-0.0 Source of report of O86 (other puerperal infections) +132290-0.0 Source of report of O87 (venous complications in the puerperium) +132292-0.0 Source of report of O88 (obstetric embolism) +132294-0.0 Source of report of O89 (complications of anaesthesia during the puerperium) +132296-0.0 "Source of report of O90 (complications of the puerperium, not elsewhere classified)" +132298-0.0 Source of report of O91 (infections of breast associated with childbirth) +132300-0.0 Source of report of O92 (other disorders of breast and lactation associated with childbirth) +132302-0.0 "Source of report of O94 (sequelae of complication of pregnancy, childbirth and the puerperium)" +132306-0.0 Source of report of O96 (death from any obstetric cause occurring more than 42 days but less than one year after delivery) +132310-0.0 "Source of report of O98 (maternal infectious and parasitic diseases classifiable elsewhere but complicating pregnancy, childbirth and the puerperium)" +132312-0.0 "Source of report of O99 (other maternal diseases classifiable elsewhere but complicating pregnancy, childbirth and the puerperium)" +132314-0.0 Source of report of P00 (foetus and newborn affected by maternal conditions that may be unrelated to present pregnancy) +132318-0.0 "Source of report of P02 (foetus and newborn affected by complications of placenta, cord and membranes)" +132320-0.0 Source of report of P03 (foetus and newborn affected by other complications of labour and delivery) +132322-0.0 Source of report of P04 (foetus and newborn affected by noxious influences transmitted via placenta or breast milk) +132324-0.0 Source of report of P05 (slow foetal growth and foetal malnutrition) +132326-0.0 "Source of report of P07 (disorders related to short gestation and low birth weight, not elsewhere classified)" +132328-0.0 Source of report of P08 (disorders related to long gestation and high birth weight) +132330-0.0 Source of report of P10 (intracranial laceration and haemorrhage due to birth injury) +132332-0.0 Source of report of P11 (other birth injuries to central nervous system) +132334-0.0 Source of report of P12 (birth injury to scalp) +132336-0.0 Source of report of P13 (birth injury to skeleton) +132338-0.0 Source of report of P14 (birth injury to peripheral nervous system) +132340-0.0 Source of report of P15 (other birth injuries) +132342-0.0 Source of report of P20 (intra-uterine hypoxia) +132344-0.0 Source of report of P21 (birth asphyxia) +132346-0.0 Source of report of P22 (respiratory distress of newborn) +132348-0.0 Source of report of P23 (congenital pneumonia) +132350-0.0 Source of report of P24 (neonatal aspiration syndromes) +132352-0.0 Source of report of P25 (interstitial emphysema and related conditions originating in the perinatal period) +132354-0.0 Source of report of P26 (pulmonary haemorrhage originating in the perinatal period) +132356-0.0 Source of report of P27 (chronic respiratory disease originating in the perinatal period) +132358-0.0 Source of report of P28 (other respiratory conditions originating in the perinatal period) +132360-0.0 Source of report of P29 (cardiovascular disorders originating in the perinatal period) +132362-0.0 Source of report of P35 (congenital viral diseases) +132364-0.0 Source of report of P36 (bacterial sepsis of newborn) +132366-0.0 Source of report of P37 (other congenital infectious and parasitic diseases) +132368-0.0 Source of report of P38 (omphalitis of newborn with or without mild haemorrhage) +132370-0.0 Source of report of P39 (other infections specific to the perinatal period) +132372-0.0 Source of report of P50 (foetal blood loss) +132374-0.0 Source of report of P51 (umbilical haemorrhage of newborn) +132376-0.0 Source of report of P52 (intracranial nontraumatic haemorrhage of foetus and newborn) +132378-0.0 Source of report of P53 (haemorrhagic disease of foetus and newborn) +132380-0.0 Source of report of P54 (other neonatal haemorrhages) +132382-0.0 Source of report of P55 (haemolytic disease of foetus and newborn) +132388-0.0 Source of report of P58 (neonatal jaundice due to other excessive haemolysis) +132390-0.0 Source of report of P59 (neonatal jaundice from other and unspecified causes) +132394-0.0 Source of report of P61 (other perinatal haematological disorders) +132396-0.0 Source of report of P70 (transitory disorders of carbohydrate metabolism specific to foetus and newborn) +132398-0.0 Source of report of P71 (transitory neonatal disorders of calcium and magnesium metabolism) +132410-0.0 Source of report of P78 (other perinatal digestive system disorders) +132416-0.0 Source of report of P83 (other conditions of integument specific to foetus and newborn) +132420-0.0 Source of report of P91 (other disturbances of cerebral status of newborn) +132422-0.0 Source of report of P92 (feeding problems of newborn) +132426-0.0 Source of report of P94 (disorders of muscle tone of newborn) +132428-0.0 Source of report of P95 (foetal death of unspecified cause) +132430-0.0 Source of report of P96 (other conditions originating in the perinatal period) +132432-0.0 Source of report of Q00 (anencephaly and similar malformations) +132434-0.0 Source of report of Q01 (encephalocele) +132436-0.0 Source of report of Q02 (microcephaly) +132438-0.0 Source of report of Q03 (congenital hydrocephalus) +132440-0.0 Source of report of Q04 (other congenital malformations of brain) +132442-0.0 Source of report of Q05 (spina bifida) +132444-0.0 Source of report of Q06 (other congenital malformations of spinal cord) +132446-0.0 Source of report of Q07 (other congenital malformations of nervous system) +132448-0.0 "Source of report of Q10 (congenital malformations of eyelid, lachrymal apparatus and orbit)" +132450-0.0 "Source of report of Q11 (anophthalmos, microphthalmos and macrophthalmos)" +132452-0.0 Source of report of Q12 (congenital lens malformations) +132454-0.0 Source of report of Q13 (congenital malformations of anterior segment of eye) +132456-0.0 Source of report of Q14 (congenital malformations of posterior segment of eye) +132458-0.0 Source of report of Q15 (other congenital malformations of eye) +132460-0.0 Source of report of Q16 (congenital malformations of ear causing impairment of hearing) +132462-0.0 Source of report of Q17 (other congenital malformations of ear) +132464-0.0 Source of report of Q18 (other congenital malformations of face and neck) +132466-0.0 Source of report of Q20 (congenital malformations of cardiac chambers and connexions) +132468-0.0 Source of report of Q21 (congenital malformations of cardiac septa) +132470-0.0 Source of report of Q22 (congenital malformations of pulmonary and tricuspid valves) +132472-0.0 Source of report of Q23 (congenital malformations of aortic and mitral valves) +132474-0.0 Source of report of Q24 (other congenital malformations of heart) +132476-0.0 Source of report of Q25 (congenital malformations of great arteries) +132478-0.0 Source of report of Q26 (congenital malformations of great veins) +132480-0.0 Source of report of Q27 (other congenital malformations of peripheral vascular system) +132482-0.0 Source of report of Q28 (other congenital malformations of circulatory system) +132484-0.0 Source of report of Q30 (congenital malformations of nose) +132486-0.0 Source of report of Q31 (congenital malformations of larynx) +132488-0.0 Source of report of Q32 (congenital malformations of trachea and bronchus) +132490-0.0 Source of report of Q33 (congenital malformations of lung) +132492-0.0 Source of report of Q34 (other congenital malformations of respiratory system) +132494-0.0 Source of report of Q35 (cleft palate) +132496-0.0 Source of report of Q36 (cleft lip) +132498-0.0 Source of report of Q37 (cleft palate with cleft lip) +132500-0.0 "Source of report of Q38 (other congenital malformations of tongue, mouth and pharynx)" +132502-0.0 Source of report of Q39 (congenital malformations of oesophagus) +132504-0.0 Source of report of Q40 (other congenital malformations of upper alimentary tract) +132506-0.0 "Source of report of Q41 (congenital absence, atresia and stenosis of small intestine)" +132508-0.0 "Source of report of Q42 (congenital absence, atresia and stenosis of large intestine)" +132510-0.0 Source of report of Q43 (other congenital malformations of intestine) +132512-0.0 "Source of report of Q44 (congenital malformations of gallbladder, bile ducts and liver)" +132514-0.0 Source of report of Q45 (other congenital malformations of digestive system) +132516-0.0 "Source of report of Q50 (congenital malformations of ovaries, fallopian tubes and broad ligaments)" +132518-0.0 Source of report of Q51 (congenital malformations of uterus and cervix) +132520-0.0 Source of report of Q52 (other congenital malformations of female genitalia) +132522-0.0 Source of report of Q53 (undescended testicle) +132524-0.0 Source of report of Q54 (hypospadias) +132526-0.0 Source of report of Q55 (other congenital malformations of male genital organs) +132528-0.0 Source of report of Q56 (indeterminate sex and pseudohermaphroditism) +132530-0.0 Source of report of Q60 (renal agenesis and other reduction defects of kidney) +132532-0.0 Source of report of Q61 (cystic kidney disease) +132534-0.0 Source of report of Q62 (congenital obstructive defects of renal pelvis and congenital malformations of ureter) +132536-0.0 Source of report of Q63 (other congenital malformations of kidney) +132538-0.0 Source of report of Q64 (other congenital malformations of urinary system) +132540-0.0 Source of report of Q65 (congenital deformities of hip) +132542-0.0 Source of report of Q66 (congenital deformities of feet) +132544-0.0 "Source of report of Q67 (congenital musculoskeletal deformities of head, face, spine and chest)" +132546-0.0 Source of report of Q68 (other congenital musculoskeletal deformities) +132548-0.0 Source of report of Q69 (polydactyly) +132550-0.0 Source of report of Q70 (syndactyly) +132552-0.0 Source of report of Q71 (reduction defects of upper limb) +132554-0.0 Source of report of Q72 (reduction defects of lower limb) +132556-0.0 Source of report of Q73 (reduction defects of unspecified limb) +132558-0.0 Source of report of Q74 (other congenital malformations of limb(s)) +132560-0.0 Source of report of Q75 (other congenital malformations of skull and face bones) +132562-0.0 Source of report of Q76 (congenital malformations of spine and bony thorax) +132564-0.0 Source of report of Q77 (osteochondrodysplasia with defects of growth of tubular bones and spine) +132566-0.0 Source of report of Q78 (other osteochondrodysplasias) +132568-0.0 "Source of report of Q79 (congenital malformations of musculoskeletal system, not elsewhere classified)" +132570-0.0 Source of report of Q80 (congenital ichthyosis) +132572-0.0 Source of report of Q81 (epidermolysis bullosa) +132574-0.0 Source of report of Q82 (other congenital malformations of skin) +132576-0.0 Source of report of Q83 (congenital malformations of breast) +132578-0.0 Source of report of Q84 (other congenital malformations of integument) +132580-0.0 "Source of report of Q85 (phakomatoses, not elsewhere classified)" +132582-0.0 "Source of report of Q86 (congenital malformation syndromes due to known exogenous causes, not elsewhere classified)" +132584-0.0 Source of report of Q87 (other specified congenital malformation syndromes affecting multiple systems) +132586-0.0 "Source of report of Q89 (other congenital malformations, not elsewhere classified)" +132588-0.0 Source of report of Q90 (down's syndrome) +132590-0.0 Source of report of Q91 (edwards' syndrome and patau's syndrome) +132592-0.0 "Source of report of Q92 (other trisomies and partial trisomies of the autosomes, not elsewhere classified)" +132594-0.0 "Source of report of Q93 (monosomies and deletions from the autosomes, not elsewhere classified)" +132596-0.0 "Source of report of Q95 (balanced rearrangements and structural markers, not elsewhere classified)" +132598-0.0 Source of report of Q96 (turner's syndrome) +132600-0.0 "Source of report of Q97 (other sex chromosome abnormalities, female phenotype, not elsewhere classified)" +132602-0.0 "Source of report of Q98 (other sex chromosome abnormalities, male phenotype, not elsewhere classified)" +132604-0.0 "Source of report of Q99 (other chromosome abnormalities, not elsewhere classified)" diff --git a/labels.csv b/labels.csv new file mode 100644 index 0000000..7192e4e --- /dev/null +++ b/labels.csv @@ -0,0 +1,1257 @@ +A00 (cholera) +A01 (typhoid and paratyphoid fevers) +A02 (other salmonella infections) +A03 (shigellosis) +A04 (other bacterial intestinal infections) +A05 (other bacterial foodborne intoxications) +A06 (amoebiasis) +A07 (other protozoal intestinal diseases) +A08 (viral and other specified intestinal infections) +A09 (diarrhoea and gastro-enteritis of presumed infectious origin) +A15 (respiratory tuberculosis, bacteriologically and histologically confirmed) +A16 (respiratory tuberculosis, not confirmed bacteriologically or histologically) +A17 (tuberculosis of nervous system) +A18 (tuberculosis of other organs) +A19 (miliary tuberculosis) +A20 (plague) +A22 (anthrax) +A23 (brucellosis) +A24 (glanders and melioidosis) +A25 (rat-bite fevers) +A26 (erysipeloid) +A27 (leptospirosis) +A28 (other zoonotic bacterial diseases, not elsewhere classified) +A30 (leprosy [hansen's disease]) +A31 (infection due to other mycobacteria) +A32 (listeriosis) +A33 (tetanus neonatorum) +A35 (other tetanus) +A36 (diphtheria) +A37 (whooping cough) +A38 (scarlet fever) +A39 (meningococcal infection) +A40 (streptococcal septicaemia) +A41 (other septicaemia) +A42 (actinomycosis) +A43 (nocardiosis) +A44 (bartonellosis) +A46 (erysipelas) +A48 (other bacterial diseases, not elsewhere classified) +A49 (bacterial infection of unspecified site) +A50 (congenital syphilis) +A51 (early syphilis) +A52 (late syphilis) +A53 (other and unspecified syphilis) +A54 (gonococcal infection) +A55 (chlamydial lymphogranuloma (venereum)) +A56 (other sexually transmitted chlamydial diseases) +A58 (granuloma inguinale) +A59 (trichomoniasis) +A60 (anogenital herpesviral [herpes simplex] infections) +A63 (other predominantly sexually transmitted diseases, not elsewhere classified) +A64 (unspecified sexually transmitted disease) +A66 (yaws) +A67 (pinta [carate]) +A68 (relapsing fevers) +A69 (other spirochaetal infections) +A70 (chlamydia psittaci infection) +A71 (trachoma) +A74 (other diseases caused by chlamydiae) +A75 (typhus fever) +A77 (spotted fever [tick-borne rickettsioses]) +A78 (q fever) +A79 (other rickettsioses) +A80 (acute poliomyelitis) +A81 (atypical virus infections of central nervous system) +A82 (rabies) +A83 (mosquito-borne viral encephalitis) +A84 (tick-borne viral encephalitis) +A85 (other viral encephalitis, not elsewhere classified) +A86 (unspecified viral encephalitis) +A87 (viral meningitis) +A88 (other viral infections of central nervous system, not elsewhere classified) +A89 (unspecified viral infection of central nervous system) +A90 (dengue fever [classical dengue]) +A91 (dengue haemorrhagic fever) +A92 (other mosquito-borne viral fevers) +A93 (other arthropod-borne viral fevers, not elsewhere classified) +A94 (unspecified arthropod-borne viral fever) +A95 (yellow fever) +A97 (dengue) +A98 (other viral haemorrhagic fevers, not elsewhere classified) +B00 (herpesviral [herpes simplex] infections) +B01 (varicella [chickenpox]) +B02 (zoster [herpes zoster]) +B03 (smallpox) +B05 (measles) +B06 (rubella [german measles]) +B07 (viral warts) +B08 (other viral infections characterised by skin and mucous membrane lesions, not elsewhere classified) +B09 (unspecified viral infection characterised by skin and mucous membrane lesions) +B15 (acute hepatitis a) +B16 (acute hepatitis b) +B17 (other acute viral hepatitis) +B18 (chronic viral hepatitis) +B19 (unspecified viral hepatitis) +B20 (human immunodeficiency virus [hiv] disease resulting in infectious and parasitic diseases) +B21 (human immunodeficiency virus [hiv] disease resulting in malignant neoplasms) +B22 (human immunodeficiency virus [hiv] disease resulting in other specified diseases) +B23 (human immunodeficiency virus [hiv] disease resulting in other conditions) +B24 (unspecified human immunodeficiency virus [hiv] disease) +B25 (cytomegaloviral disease) +B26 (mumps) +B27 (infectious mononucleosis) +B30 (viral conjunctivitis) +B33 (other viral diseases, not elsewhere classified) +B34 (viral infection of unspecified site) +B35 (dermatophytosis) +B36 (other superficial mycoses) +B37 (candidiasis) +B38 (coccidioidomycosis) +B39 (histoplasmosis) +B40 (blastomycosis) +B42 (sporotrichosis) +B43 (chromomycosis and phaeomycotic abscess) +B44 (aspergillosis) +B45 (cryptococcosis) +B46 (zygomycosis) +B47 (mycetoma) +B48 (other mycoses, not elsewhere classified) +B49 (unspecified mycosis) +B50 (plasmodium falciparum malaria) +B51 (plasmodium vivax malaria) +B52 (plasmodium malariae malaria) +B53 (other parasitologically confirmed malaria) +B54 (unspecified malaria) +B55 (leishmaniasis) +B57 (chagas' disease) +B58 (toxoplasmosis) +B59 (pneumocystosis) +B60 (other protozoal diseases, not elsewhere classified) +B65 (schistosomiasis [bilharziasis]) +B66 (other fluke infections) +B67 (echinococcosis) +B68 (taeniasis) +B69 (cysticercosis) +B71 (other cestode infections) +B73 (onchocerciasis) +B74 (filariasis) +B75 (trichinellosis) +B76 (hookworm diseases) +B77 (ascariasis) +B78 (strongyloidiasis) +B79 (trichuriasis) +B80 (enterobiasis) +B81 (other intestinal helminthiases, not elsewhere classified) +B82 (unspecified intestinal parasitism) +B83 (other helminthiases) +B85 (pediculosis and phthiriasis) +B86 (scabies) +B87 (myiasis) +B88 (other infestations) +B89 (unspecified parasitic disease) +B90 (sequelae of tuberculosis) +B91 (sequelae of poliomyelitis) +B94 (sequelae of other and unspecified infectious and parasitic diseases) +B95 (streptococcus and staphylococcus as the cause of diseases classified to other chapters) +B96 (other bacterial agents as the cause of diseases classified to other chapters) +B97 (viral agents as the cause of diseases classified to other chapters) +B98 (other specified infectious agents as the cause of diseases classified to other chapters) +B99 (other and unspecified infectious diseases) +D50 (iron deficiency anaemia) +D51 (vitamin b12 deficiency anaemia) +D52 (folate deficiency anaemia) +D53 (other nutritional anaemias) +D55 (anaemia due to enzyme disorders) +D56 (thalassaemia) +D57 (sickle-cell disorders) +D58 (other hereditary haemolytic anaemias) +D59 (acquired haemolytic anaemia) +D60 (acquired pure red cell aplasia [erythroblastopenia]) +D61 (other aplastic anaemias) +D62 (acute posthaemorrhagic anaemia) +D63 (anaemia in chronic diseases classified elsewhere) +D64 (other anaemias) +D65 (disseminated intravascular coagulation [defibrination syndrome]) +D66 (hereditary factor viii deficiency) +D67 (hereditary factor ix deficiency) +D68 (other coagulation defects) +D69 (purpura and other haemorrhagic conditions) +D70 (agranulocytosis) +D71 (functional disorders of polymorphonuclear neutrophils) +D72 (other disorders of white blood cells) +D73 (diseases of spleen) +D74 (methaemoglobinaemia) +D75 (other diseases of blood and blood-forming organs) +D76 (certain diseases involving lymphoreticular tissue and reticulohistiocytic system) +D77 (other disorders of blood and blood-forming organs in diseases classified elsewhere) +D80 (immunodeficiency with predominantly antibody defects) +D81 (combined immunodeficiencies) +D82 (immunodeficiency associated with other major defects) +D83 (common variable immunodeficiency) +D84 (other immunodeficiencies) +D86 (sarcoidosis) +D89 (other disorders involving the immune mechanism, not elsewhere classified) +E01 (iodine-deficiency-related thyroid disorders and allied conditions) +E02 (subclinical iodine-deficiency hypothyroidism) +E03 (other hypothyroidism) +E04 (other non-toxic goitre) +E05 (thyrotoxicosis [hyperthyroidism]) +E06 (thyroiditis) +E07 (other disorders of thyroid) +E10 (insulin-dependent diabetes mellitus) +E11 (non-insulin-dependent diabetes mellitus) +E12 (malnutrition-related diabetes mellitus) +E13 (other specified diabetes mellitus) +E14 (unspecified diabetes mellitus) +E15 (nondiabetic hypoglycaemic coma) +E16 (other disorders of pancreatic internal secretion) +E20 (hypoparathyroidism) +E21 (hyperparathyroidism and other disorders of parathyroid gland) +E22 (hyperfunction of pituitary gland) +E23 (hypofunction and other disorders of pituitary gland) +E24 (cushing's syndrome) +E25 (adrenogenital disorders) +E26 (hyperaldosteronism) +E27 (other disorders of adrenal gland) +E28 (ovarian dysfunction) +E29 (testicular dysfunction) +E30 (disorders of puberty, not elsewhere classified) +E31 (polyglandular dysfunction) +E32 (diseases of thymus) +E34 (other endocrine disorders) +E35 (disorders of endocrine glands in diseases classified elsewhere) +E41 (nutritional marasmus) +E43 (unspecified severe protein-energy malnutrition) +E44 (protein-energy malnutrition of moderate and mild degree) +E45 (retarded development following protein-energy malnutrition) +E46 (unspecified protein-energy malnutrition) +E50 (vitamin a deficiency) +E51 (thiamine deficiency) +E52 (niacin deficiency [pellagra]) +E53 (deficiency of other b group vitamins) +E54 (ascorbic acid deficiency) +E55 (vitamin d deficiency) +E56 (other vitamin deficiencies) +E58 (dietary calcium deficiency) +E59 (dietary selenium deficiency) +E60 (dietary zinc deficiency) +E61 (deficiency of other nutrient elements) +E63 (other nutritional deficiencies) +E64 (sequelae of malnutrition and other nutritional deficiencies) +E65 (localised adiposity) +E66 (obesity) +E67 (other hyperalimentation) +E68 (sequelae of hyperalimentation) +E70 (disorders of aromatic amino-acid metabolism) +E71 (disorders of branched-chain amino-acid metabolism and fatty-acid metabolism) +E72 (other disorders of amino-acid metabolism) +E73 (lactose intolerance) +E74 (other disorders of carbohydrate metabolism) +E75 (disorders of sphingolipid metabolism and other lipid storage disorders) +E76 (disorders of glycosaminoglycan metabolism) +E77 (disorders of glycoprotein metabolism) +E78 (disorders of lipoprotein metabolism and other lipidaemias) +E79 (disorders of purine and pyrimidine metabolism) +E80 (disorders of porphyrin and bilirubin metabolism) +E83 (disorders of mineral metabolism) +E84 (cystic fibrosis) +E85 (amyloidosis) +E86 (volume depletion) +E87 (other disorders of fluid, electrolyte and acid-base balance) +E88 (other metabolic disorders) +E89 (postprocedural endocrine and metabolic disorders, not elsewhere classified) +F00 (dementia in alzheimer's disease) +F01 (vascular dementia) +F02 (dementia in other diseases classified elsewhere) +F03 (unspecified dementia) +F04 (organic amnesic syndrome, not induced by alcohol and other psychoactive substances) +F05 (delirium, not induced by alcohol and other psychoactive substances) +F06 (other mental disorders due to brain damage and dysfunction and to physical disease) +F07 (personality and behavioural disorders due to brain disease, damage and dysfunction) +F09 (unspecified organic or symptomatic mental disorder) +F10 (mental and behavioural disorders due to use of alcohol) +F11 (mental and behavioural disorders due to use of opioids) +F12 (mental and behavioural disorders due to use of cannabinoids) +F13 (mental and behavioural disorders due to use of sedatives or hypnotics) +F14 (mental and behavioural disorders due to use of cocaine) +F15 (mental and behavioural disorders due to use of other stimulants, including caffeine) +F16 (mental and behavioural disorders due to use of hallucinogens) +F17 (mental and behavioural disorders due to use of tobacco) +F18 (mental and behavioural disorders due to use of volatile solvents) +F19 (mental and behavioural disorders due to multiple drug use and use of other psychoactive substances) +F20 (schizophrenia) +F21 (schizotypal disorder) +F22 (persistent delusional disorders) +F23 (acute and transient psychotic disorders) +F24 (induced delusional disorder) +F25 (schizoaffective disorders) +F28 (other nonorganic psychotic disorders) +F29 (unspecified nonorganic psychosis) +F30 (manic episode) +F31 (bipolar affective disorder) +F32 (depressive episode) +F33 (recurrent depressive disorder) +F34 (persistent mood [affective] disorders) +F38 (other mood [affective] disorders) +F39 (unspecified mood [affective] disorder) +F40 (phobic anxiety disorders) +F41 (other anxiety disorders) +F42 (obsessive-compulsive disorder) +F43 (reaction to severe stress, and adjustment disorders) +F44 (dissociative [conversion] disorders) +F45 (somatoform disorders) +F48 (other neurotic disorders) +F50 (eating disorders) +F51 (nonorganic sleep disorders) +F52 (sexual dysfunction, not caused by organic disorder or disease) +F53 (mental and behavioural disorders associated with the puerperium, not elsewhere classified) +F54 (psychological and behavioural factors associated with disorders or diseases classified elsewhere) +F55 (abuse of non-dependence-producing substances) +F59 (unspecified behavioural syndromes associated with physiological disturbances and physical factors) +F60 (specific personality disorders) +F61 (mixed and other personality disorders) +F62 (enduring personality changes, not attributable to brain damage and disease) +F63 (habit and impulse disorders) +F64 (gender identity disorders) +F65 (disorders of sexual preference) +F66 (psychological and behavioural disorders associated with sexual development and orientation) +F68 (other disorders of adult personality and behaviour) +F69 (unspecified disorder of adult personality and behaviour) +F70 (mild mental retardation) +F71 (moderate mental retardation) +F72 (severe mental retardation) +F78 (other mental retardation) +F79 (unspecified mental retardation) +F80 (specific developmental disorders of speech and language) +F81 (specific developmental disorders of scholastic skills) +F82 (specific developmental disorder of motor function) +F83 (mixed specific developmental disorders) +F84 (pervasive developmental disorders) +F88 (other disorders of psychological development) +F89 (unspecified disorder of psychological development) +F90 (hyperkinetic disorders) +F91 (conduct disorders) +F92 (mixed disorders of conduct and emotions) +F93 (emotional disorders with onset specific to childhood) +F94 (disorders of social functioning with onset specific to childhood and adolescence) +F95 (tic disorders) +F98 (other behavioural and emotional disorders with onset usually occurring in childhood and adolescence) +F99 (mental disorder, not otherwise specified) +G00 (bacterial meningitis, not elsewhere classified) +G01 (meningitis in bacterial diseases classified elsewhere) +G02 (meningitis in other infectious and parasitic diseases classified elsewhere) +G03 (meningitis due to other and unspecified causes) +G04 (encephalitis, myelitis and encephalomyelitis) +G05 (encephalitis, myelitis and encephalomyelitis in diseases classified elsewhere) +G06 (intracranial and intraspinal abscess and granuloma) +G07 (intracranial and intraspinal abscess and granuloma in diseases classified elsewhere) +G08 (intracranial and intraspinal phlebitis and thrombophlebitis) +G09 (sequelae of inflammatory diseases of central nervous system) +G10 (huntington's disease) +G11 (hereditary ataxia) +G12 (spinal muscular atrophy and related syndromes) +G13 (systemic atrophies primarily affecting central nervous system in diseases classified elsewhere) +G14 (postpolio syndrome) +G20 (parkinson's disease) +G21 (secondary parkinsonism) +G22 (parkinsonism in diseases classified elsewhere) +G23 (other degenerative diseases of basal ganglia) +G24 (dystonia) +G25 (other extrapyramidal and movement disorders) +G30 (alzheimer's disease) +G31 (other degenerative diseases of nervous system, not elsewhere classified) +G32 (other degenerative disorders of nervous system in diseases classified elsewhere) +G35 (multiple sclerosis) +G36 (other acute disseminated demyelination) +G37 (other demyelinating diseases of central nervous system) +G40 (epilepsy) +G41 (status epilepticus) +G43 (migraine) +G44 (other headache syndromes) +G45 (transient cerebral ischaemic attacks and related syndromes) +G46 (vascular syndromes of brain in cerebrovascular diseases) +G47 (sleep disorders) +G50 (disorders of trigeminal nerve) +G51 (facial nerve disorders) +G52 (disorders of other cranial nerves) +G53 (cranial nerve disorders in diseases classified elsewhere) +G54 (nerve root and plexus disorders) +G55 (nerve root and plexus compressions in diseases classified elsewhere) +G56 (mononeuropathies of upper limb) +G57 (mononeuropathies of lower limb) +G58 (other mononeuropathies) +G59 (mononeuropathy in diseases classified elsewhere) +G60 (hereditary and idiopathic neuropathy) +G61 (inflammatory polyneuropathy) +G62 (other polyneuropathies) +G63 (polyneuropathy in diseases classified elsewhere) +G64 (other disorders of peripheral nervous system) +G70 (myasthenia gravis and other myoneural disorders) +G71 (primary disorders of muscles) +G72 (other myopathies) +G73 (disorders of myoneural junction and muscle in diseases classified elsewhere) +G80 (infantile cerebral palsy) +G81 (hemiplegia) +G82 (paraplegia and tetraplegia) +G83 (other paralytic syndromes) +G90 (disorders of autonomic nervous system) +G91 (hydrocephalus) +G92 (toxic encephalopathy) +G93 (other disorders of brain) +G94 (other disorders of brain in diseases classified elsewhere) +G95 (other diseases of spinal cord) +G96 (other disorders of central nervous system) +G97 (postprocedural disorders of nervous system, not elsewhere classified) +G98 (other disorders of nervous system, not elsewhere classified) +G99 (other disorders of nervous system in diseases classified elsewhere) +H00 (hordeolum and chalazion) +H01 (other inflammation of eyelid) +H02 (other disorders of eyelid) +H03 (disorders of eyelid in diseases classified elsewhere) +H04 (disorders of lachrymal system) +H05 (disorders of orbit) +H06 (disorders of lachrymal system and orbit in diseases classified elsewhere) +H10 (conjunctivitis) +H11 (other disorders of conjunctiva) +H13 (disorders of conjunctiva in diseases classified elsewhere) +H15 (disorders of sclera) +H16 (keratitis) +H17 (corneal scars and opacities) +H18 (other disorders of cornea) +H19 (disorders of sclera and cornea in diseases classified elsewhere) +H20 (iridocyclitis) +H21 (other disorders of iris and ciliary body) +H22 (disorders of iris and ciliary body in diseases classified elsewhere) +H25 (senile cataract) +H26 (other cataract) +H27 (other disorders of lens) +H28 (cataract and other disorders of lens in diseases classified elsewhere) +H30 (chorioretinal inflammation) +H31 (other disorders of choroid) +H32 (chorioretinal disorders in diseases classified elsewhere) +H33 (retinal detachments and breaks) +H34 (retinal vascular occlusions) +H35 (other retinal disorders) +H36 (retinal disorders in diseases classified elsewhere) +H40 (glaucoma) +H42 (glaucoma in diseases classified elsewhere) +H43 (disorders of vitreous body) +H44 (disorders of globe) +H45 (disorders of vitreous body and globe in diseases classified elsewhere) +H46 (optic neuritis) +H47 (other disorders of optic [2nd] nerve and visual pathways) +H48 (disorders of optic [2nd] nerve and visual pathways in diseases classified elsewhere) +H49 (paralytic strabismus) +H50 (other strabismus) +H51 (other disorders of binocular movement) +H52 (disorders of refraction and accommodation) +H53 (visual disturbances) +H54 (blindness and low vision) +H55 (nystagmus and other irregular eye movements) +H57 (other disorders of eye and adnexa) +H58 (other disorders of eye and adnexa in diseases classified elsewhere) +H59 (postprocedural disorders of eye and adnexa, not elsewhere classified) +H60 (otitis externa) +H61 (other disorders of external ear) +H62 (disorders of external ear in diseases classified elsewhere) +H65 (nonsuppurative otitis media) +H66 (suppurative and unspecified otitis media) +H67 (otitis media in diseases classified elsewhere) +H68 (eustachian salpingitis and obstruction) +H69 (other disorders of eustachian tube) +H70 (mastoiditis and related conditions) +H71 (cholesteatoma of middle ear) +H72 (perforation of tympanic membrane) +H73 (other disorders of tympanic membrane) +H74 (other disorders of middle ear and mastoid) +H75 (other disorders of middle ear and mastoid in diseases classified elsewhere) +H80 (otosclerosis) +H81 (disorders of vestibular function) +H82 (vertiginous syndromes in diseases classified elsewhere) +H83 (other diseases of inner ear) +H90 (conductive and sensorineural hearing loss) +H91 (other hearing loss) +H92 (otalgia and effusion of ear) +H93 (other disorders of ear, not elsewhere classified) +H94 (other disorders of ear in diseases classified elsewhere) +H95 (postprocedural disorders of ear and mastoid process, not elsewhere classified) +I00 (rheumatic fever without mention of heart involvement) +I01 (rheumatic fever with heart involvement) +I02 (rheumatic chorea) +I05 (rheumatic mitral valve diseases) +I06 (rheumatic aortic valve diseases) +I07 (rheumatic tricuspid valve diseases) +I08 (multiple valve diseases) +I09 (other rheumatic heart diseases) +I10 (essential (primary) hypertension) +I11 (hypertensive heart disease) +I12 (hypertensive renal disease) +I13 (hypertensive heart and renal disease) +I15 (secondary hypertension) +I20 (angina pectoris) +I21 (acute myocardial infarction) +I22 (subsequent myocardial infarction) +I23 (certain current complications following acute myocardial infarction) +I24 (other acute ischaemic heart diseases) +I25 (chronic ischaemic heart disease) +I26 (pulmonary embolism) +I27 (other pulmonary heart diseases) +I28 (other diseases of pulmonary vessels) +I30 (acute pericarditis) +I31 (other diseases of pericardium) +I32 (pericarditis in diseases classified elsewhere) +I33 (acute and subacute endocarditis) +I34 (nonrheumatic mitral valve disorders) +I35 (nonrheumatic aortic valve disorders) +I36 (nonrheumatic tricuspid valve disorders) +I37 (pulmonary valve disorders) +I38 (endocarditis, valve unspecified) +I39 (endocarditis and heart valve disorders in diseases classified elsewhere) +I40 (acute myocarditis) +I41 (myocarditis in diseases classified elsewhere) +I42 (cardiomyopathy) +I43 (cardiomyopathy in diseases classified elsewhere) +I44 (atrioventricular and left bundle-branch block) +I45 (other conduction disorders) +I46 (cardiac arrest) +I47 (paroxysmal tachycardia) +I48 (atrial fibrillation and flutter) +I49 (other cardiac arrhythmias) +I50 (heart failure) +I51 (complications and ill-defined descriptions of heart disease) +I52 (other heart disorders in diseases classified elsewhere) +I60 (subarachnoid haemorrhage) +I61 (intracerebral haemorrhage) +I62 (other nontraumatic intracranial haemorrhage) +I63 (cerebral infarction) +I64 (stroke, not specified as haemorrhage or infarction) +I65 (occlusion and stenosis of precerebral arteries, not resulting in cerebral infarction) +I66 (occlusion and stenosis of cerebral arteries, not resulting in cerebral infarction) +I67 (other cerebrovascular diseases) +I68 (cerebrovascular disorders in diseases classified elsewhere) +I69 (sequelae of cerebrovascular disease) +I70 (atherosclerosis) +I71 (aortic aneurysm and dissection) +I72 (other aneurysm) +I73 (other peripheral vascular diseases) +I74 (arterial embolism and thrombosis) +I77 (other disorders of arteries and arterioles) +I78 (diseases of capillaries) +I79 (disorders of arteries, arterioles and capillaries in diseases classified elsewhere) +I80 (phlebitis and thrombophlebitis) +I81 (portal vein thrombosis) +I82 (other venous embolism and thrombosis) +I83 (varicose veins of lower extremities) +I84 (haemorrhoids) +I85 (oesophageal varices) +I86 (varicose veins of other sites) +I87 (other disorders of veins) +I88 (nonspecific lymphadenitis) +I89 (other non-infective disorders of lymphatic vessels and lymph nodes) +I95 (hypotension) +I97 (postprocedural disorders of circulatory system, not elsewhere classified) +I98 (other disorders of circulatory system in diseases classified elsewhere) +I99 (other and unspecified disorders of circulatory system) +J00 (acute nasopharyngitis [common cold]) +J01 (acute sinusitis) +J02 (acute pharyngitis) +J03 (acute tonsillitis) +J04 (acute laryngitis and tracheitis) +J05 (acute obstructive laryngitis [croup] and epiglottitis) +J06 (acute upper respiratory infections of multiple and unspecified sites) +J09 (influenza due to certain identified influenza virus) +J10 (influenza due to identified influenza virus) +J11 (influenza, virus not identified) +J12 (viral pneumonia, not elsewhere classified) +J13 (pneumonia due to streptococcus pneumoniae) +J14 (pneumonia due to haemophilus influenzae) +J15 (bacterial pneumonia, not elsewhere classified) +J16 (pneumonia due to other infectious organisms, not elsewhere classified) +J17 (pneumonia in diseases classified elsewhere) +J18 (pneumonia, organism unspecified) +J20 (acute bronchitis) +J21 (acute bronchiolitis) +J22 (unspecified acute lower respiratory infection) +J30 (vasomotor and allergic rhinitis) +J31 (chronic rhinitis, nasopharyngitis and pharyngitis) +J32 (chronic sinusitis) +J33 (nasal polyp) +J34 (other disorders of nose and nasal sinuses) +J35 (chronic diseases of tonsils and adenoids) +J36 (peritonsillar abscess) +J37 (chronic laryngitis and laryngotracheitis) +J38 (diseases of vocal cords and larynx, not elsewhere classified) +J39 (other diseases of upper respiratory tract) +J40 (bronchitis, not specified as acute or chronic) +J41 (simple and mucopurulent chronic bronchitis) +J42 (unspecified chronic bronchitis) +J43 (emphysema) +J44 (other chronic obstructive pulmonary disease) +J45 (asthma) +J46 (status asthmaticus) +J47 (bronchiectasis) +J60 (coalworker's pneumoconiosis) +J61 (pneumoconiosis due to asbestos and other mineral fibres) +J62 (pneumoconiosis due to dust containing silica) +J63 (pneumoconiosis due to other inorganic dusts) +J64 (unspecified pneumoconiosis) +J66 (airway disease due to specific organic dust) +J67 (hypersensitivity pneumonitis due to organic dust) +J68 (respiratory conditions due to inhalation of chemicals, gases, fumes and vapours) +J69 (pneumonitis due to solids and liquids) +J70 (respiratory conditions due to other external agents) +J80 (adult respiratory distress syndrome) +J81 (pulmonary oedema) +J82 (pulmonary eosinophilia, not elsewhere classified) +J84 (other interstitial pulmonary diseases) +J85 (abscess of lung and mediastinum) +J86 (pyothorax) +J90 (pleural effusion, not elsewhere classified) +J91 (pleural effusion in conditions classified elsewhere) +J92 (pleural plaque) +J93 (pneumothorax) +J94 (other pleural conditions) +J95 (postprocedural respiratory disorders, not elsewhere classified) +J96 (respiratory failure, not elsewhere classified) +J98 (other respiratory disorders) +J99 (respiratory disorders in diseases classified elsewhere) +K00 (disorders of tooth development and eruption) +K01 (embedded and impacted teeth) +K02 (dental caries) +K03 (other diseases of hard tissues of teeth) +K04 (diseases of pulp and periapical tissues) +K05 (gingivitis and periodontal diseases) +K06 (other disorders of gingiva and edentulous alveolar ridge) +K07 (dentofacial anomalies [including malocclusion]) +K08 (other disorders of teeth and supporting structures) +K09 (cysts of oral region, not elsewhere classified) +K10 (other diseases of jaws) +K11 (diseases of salivary glands) +K12 (stomatitis and related lesions) +K13 (other diseases of lip and oral mucosa) +K14 (diseases of tongue) +K20 (oesophagitis) +K21 (gastro-oesophageal reflux disease) +K22 (other diseases of oesophagus) +K23 (disorders of oesophagus in diseases classified elsewhere) +K25 (gastric ulcer) +K26 (duodenal ulcer) +K27 (peptic ulcer, site unspecified) +K28 (gastrojejunal ulcer) +K29 (gastritis and duodenitis) +K30 (dyspepsia) +K31 (other diseases of stomach and duodenum) +K35 (acute appendicitis) +K36 (other appendicitis) +K37 (unspecified appendicitis) +K38 (other diseases of appendix) +K40 (inguinal hernia) +K41 (femoral hernia) +K42 (umbilical hernia) +K43 (ventral hernia) +K44 (diaphragmatic hernia) +K45 (other abdominal hernia) +K46 (unspecified abdominal hernia) +K50 (crohn's disease [regional enteritis]) +K51 (ulcerative colitis) +K52 (other non-infective gastro-enteritis and colitis) +K55 (vascular disorders of intestine) +K56 (paralytic ileus and intestinal obstruction without hernia) +K57 (diverticular disease of intestine) +K58 (irritable bowel syndrome) +K59 (other functional intestinal disorders) +K60 (fissure and fistula of anal and rectal regions) +K61 (abscess of anal and rectal regions) +K62 (other diseases of anus and rectum) +K63 (other diseases of intestine) +K64 (haemorrhoids and perianal venous thrombosis) +K65 (peritonitis) +K66 (other disorders of peritoneum) +K67 (disorders of peritoneum in infectious diseases classified elsewhere) +K70 (alcoholic liver disease) +K71 (toxic liver disease) +K72 (hepatic failure, not elsewhere classified) +K73 (chronic hepatitis, not elsewhere classified) +K74 (fibrosis and cirrhosis of liver) +K75 (other inflammatory liver diseases) +K76 (other diseases of liver) +K77 (liver disorders in diseases classified elsewhere) +K80 (cholelithiasis) +K81 (cholecystitis) +K82 (other diseases of gallbladder) +K83 (other diseases of biliary tract) +K85 (acute pancreatitis) +K86 (other diseases of pancreas) +K87 (disorders of gallbladder, biliary tract and pancreas in diseases classified elsewhere) +K90 (intestinal malabsorption) +K91 (postprocedural disorders of digestive system, not elsewhere classified) +K92 (other diseases of digestive system) +K93 (disorders of other digestive organs in diseases classified elsewhere) +L00 (staphylococcal scalded skin syndrome) +L01 (impetigo) +L02 (cutaneous abscess, furuncle and carbuncle) +L03 (cellulitis) +L04 (acute lymphadenitis) +L05 (pilonidal cyst) +L08 (other local infections of skin and subcutaneous tissue) +L10 (pemphigus) +L11 (other acantholytic disorders) +L12 (pemphigoid) +L13 (other bullous disorders) +L14 (bullous disorders in diseases classified elsewhere) +L20 (atopic dermatitis) +L21 (seborrhoeic dermatitis) +L22 (diaper [napkin] dermatitis) +L23 (allergic contact dermatitis) +L24 (irritant contact dermatitis) +L25 (unspecified contact dermatitis) +L26 (exfoliative dermatitis) +L27 (dermatitis due to substances taken internally) +L28 (lichen simplex chronicus and prurigo) +L29 (pruritus) +L30 (other dermatitis) +L40 (psoriasis) +L41 (parapsoriasis) +L42 (pityriasis rosea) +L43 (lichen planus) +L44 (other papulosquamous disorders) +L50 (urticaria) +L51 (erythema multiforme) +L52 (erythema nodosum) +L53 (other erythematous conditions) +L54 (erythema in diseases classified elsewhere) +L55 (sunburn) +L56 (other acute skin changes due to ultraviolet radiation) +L57 (skin changes due to chronic exposure to nonionising radiation) +L58 (radiodermatitis) +L59 (other disorders of skin and subcutaneous tissue related to radiation) +L60 (nail disorders) +L62 (nail disorders in diseases classified elsewhere) +L63 (alopecia areata) +L64 (androgenic alopecia) +L65 (other nonscarring hair loss) +L66 (cicatricial alopecia [scarring hair loss]) +L67 (hair colour and hair shaft abnormalities) +L68 (hypertrichosis) +L70 (acne) +L71 (rosacea) +L72 (follicular cysts of skin and subcutaneous tissue) +L73 (other follicular disorders) +L74 (eccrine sweat disorders) +L75 (apocrine sweat disorders) +L80 (vitiligo) +L81 (other disorders of pigmentation) +L82 (seborrhoeic keratosis) +L83 (acanthosis nigricans) +L84 (corns and callosities) +L85 (other epidermal thickening) +L86 (keratoderma in diseases classified elsewhere) +L87 (transepidermal elimination disorders) +L88 (pyoderma gangrenosum) +L89 (decubitus ulcer) +L90 (atrophic disorders of skin) +L91 (hypertrophic disorders of skin) +L92 (granulomatous disorders of skin and subcutaneous tissue) +L93 (lupus erythematosus) +L94 (other localised connective tissue disorders) +L95 (vasculitis limited to skin, not elsewhere classified) +L97 (ulcer of lower limb, not elsewhere classified) +L98 (other disorders of skin and subcutaneous tissue, not elsewhere classified) +L99 (other disorders of skin and subcutaneous tissue in diseases classified elsewhere) +M00 (pyogenic arthritis) +M01 (direct infections of joint in infectious and parasitic diseases classified elsewhere) +M02 (reactive arthropathies) +M03 (postinfective and reactive arthropathies in diseases classified elsewhere) +M05 (seropositive rheumatoid arthritis) +M06 (other rheumatoid arthritis) +M07 (psoriatic and enteropathic arthropathies) +M08 (juvenile arthritis) +M09 (juvenile arthritis in diseases classified elsewhere) +M10 (gout) +M11 (other crystal arthropathies) +M12 (other specific arthropathies) +M13 (other arthritis) +M14 (arthropathies in other diseases classified elsewhere) +M15 (polyarthrosis) +M16 (coxarthrosis [arthrosis of hip]) +M17 (gonarthrosis [arthrosis of knee]) +M18 (arthrosis of first carpometacarpal joint) +M19 (other arthrosis) +M20 (acquired deformities of fingers and toes) +M21 (other acquired deformities of limbs) +M22 (disorders of patella) +M23 (internal derangement of knee) +M24 (other specific joint derangements) +M25 (other joint disorders, not elsewhere classified) +M30 (polyarteritis nodosa and related conditions) +M31 (other necrotising vasculopathies) +M32 (systemic lupus erythematosus) +M33 (dermatopolymyositis) +M34 (systemic sclerosis) +M35 (other systemic involvement of connective tissue) +M36 (systemic disorders of connective tissue in diseases classified elsewhere) +M40 (kyphosis and lordosis) +M41 (scoliosis) +M42 (spinal osteochondrosis) +M43 (other deforming dorsopathies) +M45 (ankylosing spondylitis) +M46 (other inflammatory spondylopathies) +M47 (spondylosis) +M48 (other spondylopathies) +M49 (spondylopathies in diseases classified elsewhere) +M50 (cervical disk disorders) +M51 (other intervertebral disk disorders) +M53 (other dorsopathies, not elsewhere classified) +M54 (dorsalgia) +M60 (myositis) +M61 (calcification and ossification of muscle) +M62 (other disorders of muscle) +M63 (disorders of muscle in diseases classified elsewhere) +M65 (synovitis and tenosynovitis) +M66 (spontaneous rupture of synovium and tendon) +M67 (other disorders of synovium and tendon) +M68 (disorders of synovium and tendon in diseases classified elsewhere) +M70 (soft tissue disorders related to use, overuse and pressure) +M71 (other bursopathies) +M72 (fibroblastic disorders) +M73 (soft tissue disorders in diseases classified elsewhere) +M75 (shoulder lesions) +M76 (enthesopathies of lower limb, excluding foot) +M77 (other enthesopathies) +M79 (other soft tissue disorders, not elsewhere classified) +M80 (osteoporosis with pathological fracture) +M81 (osteoporosis without pathological fracture) +M82 (osteoporosis in diseases classified elsewhere) +M83 (adult osteomalacia) +M84 (disorders of continuity of bone) +M85 (other disorders of bone density and structure) +M86 (osteomyelitis) +M87 (osteonecrosis) +M88 (paget's disease of bone [osteitis deformans]) +M89 (other disorders of bone) +M90 (osteopathies in diseases classified elsewhere) +M91 (juvenile osteochondrosis of hip and pelvis) +M92 (other juvenile osteochondrosis) +M93 (other osteochondropathies) +M94 (other disorders of cartilage) +M95 (other acquired deformities of musculoskeletal system and connective tissue) +M96 (postprocedural musculoskeletal disorders, not elsewhere classified) +M99 (biomechanical lesions, not elsewhere classified) +N00 (acute nephritic syndrome) +N01 (rapidly progressive nephritic syndrome) +N02 (recurrent and persistent haematuria) +N03 (chronic nephritic syndrome) +N04 (nephrotic syndrome) +N05 (unspecified nephritic syndrome) +N06 (isolated proteinuria with specified morphological lesion) +N07 (hereditary nephropathy, not elsewhere classified) +N08 (glomerular disorders in diseases classified elsewhere) +N10 (acute tubulo-interstitial nephritis) +N11 (chronic tubulo-interstitial nephritis) +N12 (tubulo-interstitial nephritis, not specified as acute or chronic) +N13 (obstructive and reflux uropathy) +N14 (drug- and heavy-metal-induced tubulo-interstitial and tubular conditions) +N15 (other renal tubulo-interstitial diseases) +N16 (renal tubulo-interstitial disorders in diseases classified elsewhere) +N17 (acute renal failure) +N18 (chronic renal failure) +N19 (unspecified renal failure) +N20 (calculus of kidney and ureter) +N21 (calculus of lower urinary tract) +N22 (calculus of urinary tract in diseases classified elsewhere) +N23 (unspecified renal colic) +N25 (disorders resulting from impaired renal tubular function) +N26 (unspecified contracted kidney) +N27 (small kidney of unknown cause) +N28 (other disorders of kidney and ureter, not elsewhere classified) +N29 (other disorders of kidney and ureter in diseases classified elsewhere) +N30 (cystitis) +N31 (neuromuscular dysfunction of bladder, not elsewhere classified) +N32 (other disorders of bladder) +N33 (bladder disorders in diseases classified elsewhere) +N34 (urethritis and urethral syndrome) +N35 (urethral stricture) +N36 (other disorders of urethra) +N37 (urethral disorders in diseases classified elsewhere) +N39 (other disorders of urinary system) +N40 (hyperplasia of prostate) +N41 (inflammatory diseases of prostate) +N42 (other disorders of prostate) +N43 (hydrocele and spermatocele) +N44 (torsion of testis) +N45 (orchitis and epididymitis) +N46 (male infertility) +N47 (redundant prepuce, phimosis and paraphimosis) +N48 (other disorders of penis) +N49 (inflammatory disorders of male genital organs, not elsewhere classified) +N50 (other disorders of male genital organs) +N51 (disorders of male genital organs in diseases classified elsewhere) +N60 (benign mammary dysplasia) +N61 (inflammatory disorders of breast) +N62 (hypertrophy of breast) +N63 (unspecified lump in breast) +N64 (other disorders of breast) +N70 (salpingitis and oophoritis) +N71 (inflammatory disease of uterus, except cervix) +N72 (inflammatory disease of cervix uteri) +N73 (other female pelvic inflammatory diseases) +N74 (female pelvic inflammatory disorders in diseases classified elsewhere) +N75 (diseases of bartholin's gland) +N76 (other inflammation of vagina and vulva) +N77 (vulvovaginal ulceration and inflammation in diseases classified elsewhere) +N80 (endometriosis) +N81 (female genital prolapse) +N82 (fistulae involving female genital tract) +N83 (noninflammatory disorders of ovary, fallopian tube and broad ligament) +N84 (polyp of female genital tract) +N85 (other noninflammatory disorders of uterus, except cervix) +N86 (erosion and ectropion of cervix uteri) +N87 (dysplasia of cervix uteri) +N88 (other noninflammatory disorders of cervix uteri) +N89 (other noninflammatory disorders of vagina) +N90 (other noninflammatory disorders of vulva and perineum) +N91 (absent, scanty and rare menstruation) +N92 (excessive, frequent and irregular menstruation) +N93 (other abnormal uterine and vaginal bleeding) +N94 (pain and other conditions associated with female genital organs and menstrual cycle) +N95 (menopausal and other perimenopausal disorders) +N96 (habitual aborter) +N97 (female infertility) +N98 (complications associated with artificial fertilisation) +N99 (postprocedural disorders of genito-urinary system, not elsewhere classified) +O00 (ectopic pregnancy) +O01 (hydatidiform mole) +O02 (other abnormal products of conception) +O03 (spontaneous abortion) +O04 (medical abortion) +O05 (other abortion) +O06 (unspecified abortion) +O07 (failed attempted abortion) +O08 (complications following abortion and ectopic and molar pregnancy) +O10 (pre-existing hypertension complicating pregnancy, childbirth and the puerperium) +O11 (pre-existing hypertensive disorder with superimposed proteinuria) +O12 (gestational [pregnancy-induced] oedema and proteinuria without hypertension) +O13 (gestational [pregnancy-induced] hypertension without significant proteinuria) +O14 (gestational [pregnancy-induced] hypertension with significant proteinuria) +O15 (eclampsia) +O16 (unspecified maternal hypertension) +O20 (haemorrhage in early pregnancy) +O21 (excessive vomiting in pregnancy) +O22 (venous complications in pregnancy) +O23 (infections of genito-urinary tract in pregnancy) +O24 (diabetes mellitus in pregnancy) +O25 (malnutrition in pregnancy) +O26 (maternal care for other conditions predominantly related to pregnancy) +O28 (abnormal findings on antenatal screening of mother) +O29 (complications of anaesthesia during pregnancy) +O30 (multiple gestation) +O31 (complications specific to multiple gestation) +O32 (maternal care for known or suspected malpresentation of foetus) +O33 (maternal care for known or suspected disproportion) +O34 (maternal care for known or suspected abnormality of pelvic organs) +O35 (maternal care for known or suspected foetal abnormality and damage) +O36 (maternal care for other known or suspected foetal problems) +O40 (polyhydramnios) +O41 (other disorders of amniotic fluid and membranes) +O42 (premature rupture of membranes) +O43 (placental disorders) +O44 (placenta praevia) +O45 (premature separation of placenta [abruptio placentae]) +O46 (antepartum haemorrhage, not elsewhere classified) +O47 (false labour) +O48 (prolonged pregnancy) +O60 (preterm delivery) +O61 (failed induction of labour) +O62 (abnormalities of forces of labour) +O63 (long labour) +O64 (obstructed labour due to malposition and malpresentation of foetus) +O65 (obstructed labour due to maternal pelvic abnormality) +O66 (other obstructed labour) +O67 (labour and delivery complicated by intrapartum haemorrhage, not elsewhere classified) +O68 (labour and delivery complicated by foetal stress [distress]) +O69 (labour and delivery complicated by umbilical cord complications) +O70 (perineal laceration during delivery) +O71 (other obstetric trauma) +O72 (postpartum haemorrhage) +O73 (retained placenta and membranes, without haemorrhage) +O74 (complications of anaesthesia during labour and delivery) +O75 (other complications of labour and delivery, not elsewhere classified) +O80 (single spontaneous delivery) +O81 (single delivery by forceps and vacuum extractor) +O82 (single delivery by caesarean section) +O83 (other assisted single delivery) +O84 (multiple delivery) +O85 (puerperal sepsis) +O86 (other puerperal infections) +O87 (venous complications in the puerperium) +O88 (obstetric embolism) +O89 (complications of anaesthesia during the puerperium) +O90 (complications of the puerperium, not elsewhere classified) +O91 (infections of breast associated with childbirth) +O92 (other disorders of breast and lactation associated with childbirth) +O94 (sequelae of complication of pregnancy, childbirth and the puerperium) +O96 (death from any obstetric cause occurring more than 42 days but less than one year after delivery) +O98 (maternal infectious and parasitic diseases classifiable elsewhere but complicating pregnancy, childbirth and the puerperium) +O99 (other maternal diseases classifiable elsewhere but complicating pregnancy, childbirth and the puerperium) +P00 (foetus and newborn affected by maternal conditions that may be unrelated to present pregnancy) +P02 (foetus and newborn affected by complications of placenta, cord and membranes) +P03 (foetus and newborn affected by other complications of labour and delivery) +P04 (foetus and newborn affected by noxious influences transmitted via placenta or breast milk) +P05 (slow foetal growth and foetal malnutrition) +P07 (disorders related to short gestation and low birth weight, not elsewhere classified) +P08 (disorders related to long gestation and high birth weight) +P10 (intracranial laceration and haemorrhage due to birth injury) +P11 (other birth injuries to central nervous system) +P12 (birth injury to scalp) +P13 (birth injury to skeleton) +P14 (birth injury to peripheral nervous system) +P15 (other birth injuries) +P20 (intra-uterine hypoxia) +P21 (birth asphyxia) +P22 (respiratory distress of newborn) +P23 (congenital pneumonia) +P24 (neonatal aspiration syndromes) +P25 (interstitial emphysema and related conditions originating in the perinatal period) +P26 (pulmonary haemorrhage originating in the perinatal period) +P27 (chronic respiratory disease originating in the perinatal period) +P28 (other respiratory conditions originating in the perinatal period) +P29 (cardiovascular disorders originating in the perinatal period) +P35 (congenital viral diseases) +P36 (bacterial sepsis of newborn) +P37 (other congenital infectious and parasitic diseases) +P38 (omphalitis of newborn with or without mild haemorrhage) +P39 (other infections specific to the perinatal period) +P50 (foetal blood loss) +P51 (umbilical haemorrhage of newborn) +P52 (intracranial nontraumatic haemorrhage of foetus and newborn) +P53 (haemorrhagic disease of foetus and newborn) +P54 (other neonatal haemorrhages) +P55 (haemolytic disease of foetus and newborn) +P58 (neonatal jaundice due to other excessive haemolysis) +P59 (neonatal jaundice from other and unspecified causes) +P61 (other perinatal haematological disorders) +P70 (transitory disorders of carbohydrate metabolism specific to foetus and newborn) +P71 (transitory neonatal disorders of calcium and magnesium metabolism) +P78 (other perinatal digestive system disorders) +P83 (other conditions of integument specific to foetus and newborn) +P91 (other disturbances of cerebral status of newborn) +P92 (feeding problems of newborn) +P94 (disorders of muscle tone of newborn) +P95 (foetal death of unspecified cause) +P96 (other conditions originating in the perinatal period) +Q00 (anencephaly and similar malformations) +Q01 (encephalocele) +Q02 (microcephaly) +Q03 (congenital hydrocephalus) +Q04 (other congenital malformations of brain) +Q05 (spina bifida) +Q06 (other congenital malformations of spinal cord) +Q07 (other congenital malformations of nervous system) +Q10 (congenital malformations of eyelid, lachrymal apparatus and orbit) +Q11 (anophthalmos, microphthalmos and macrophthalmos) +Q12 (congenital lens malformations) +Q13 (congenital malformations of anterior segment of eye) +Q14 (congenital malformations of posterior segment of eye) +Q15 (other congenital malformations of eye) +Q16 (congenital malformations of ear causing impairment of hearing) +Q17 (other congenital malformations of ear) +Q18 (other congenital malformations of face and neck) +Q20 (congenital malformations of cardiac chambers and connexions) +Q21 (congenital malformations of cardiac septa) +Q22 (congenital malformations of pulmonary and tricuspid valves) +Q23 (congenital malformations of aortic and mitral valves) +Q24 (other congenital malformations of heart) +Q25 (congenital malformations of great arteries) +Q26 (congenital malformations of great veins) +Q27 (other congenital malformations of peripheral vascular system) +Q28 (other congenital malformations of circulatory system) +Q30 (congenital malformations of nose) +Q31 (congenital malformations of larynx) +Q32 (congenital malformations of trachea and bronchus) +Q33 (congenital malformations of lung) +Q34 (other congenital malformations of respiratory system) +Q35 (cleft palate) +Q36 (cleft lip) +Q37 (cleft palate with cleft lip) +Q38 (other congenital malformations of tongue, mouth and pharynx) +Q39 (congenital malformations of oesophagus) +Q40 (other congenital malformations of upper alimentary tract) +Q41 (congenital absence, atresia and stenosis of small intestine) +Q42 (congenital absence, atresia and stenosis of large intestine) +Q43 (other congenital malformations of intestine) +Q44 (congenital malformations of gallbladder, bile ducts and liver) +Q45 (other congenital malformations of digestive system) +Q50 (congenital malformations of ovaries, fallopian tubes and broad ligaments) +Q51 (congenital malformations of uterus and cervix) +Q52 (other congenital malformations of female genitalia) +Q53 (undescended testicle) +Q54 (hypospadias) +Q55 (other congenital malformations of male genital organs) +Q56 (indeterminate sex and pseudohermaphroditism) +Q60 (renal agenesis and other reduction defects of kidney) +Q61 (cystic kidney disease) +Q62 (congenital obstructive defects of renal pelvis and congenital malformations of ureter) +Q63 (other congenital malformations of kidney) +Q64 (other congenital malformations of urinary system) +Q65 (congenital deformities of hip) +Q66 (congenital deformities of feet) +Q67 (congenital musculoskeletal deformities of head, face, spine and chest) +Q68 (other congenital musculoskeletal deformities) +Q69 (polydactyly) +Q70 (syndactyly) +Q71 (reduction defects of upper limb) +Q72 (reduction defects of lower limb) +Q73 (reduction defects of unspecified limb) +Q74 (other congenital malformations of limb(s)) +Q75 (other congenital malformations of skull and face bones) +Q76 (congenital malformations of spine and bony thorax) +Q77 (osteochondrodysplasia with defects of growth of tubular bones and spine) +Q78 (other osteochondrodysplasias) +Q79 (congenital malformations of musculoskeletal system, not elsewhere classified) +Q80 (congenital ichthyosis) +Q81 (epidermolysis bullosa) +Q82 (other congenital malformations of skin) +Q83 (congenital malformations of breast) +Q84 (other congenital malformations of integument) +Q85 (phakomatoses, not elsewhere classified) +Q86 (congenital malformation syndromes due to known exogenous causes, not elsewhere classified) +Q87 (other specified congenital malformation syndromes affecting multiple systems) +Q89 (other congenital malformations, not elsewhere classified) +Q90 (down's syndrome) +Q91 (edwards' syndrome and patau's syndrome) +Q92 (other trisomies and partial trisomies of the autosomes, not elsewhere classified) +Q93 (monosomies and deletions from the autosomes, not elsewhere classified) +Q95 (balanced rearrangements and structural markers, not elsewhere classified) +Q96 (turner's syndrome) +Q97 (other sex chromosome abnormalities, female phenotype, not elsewhere classified) +Q98 (other sex chromosome abnormalities, male phenotype, not elsewhere classified) +Q99 (other chromosome abnormalities, not elsewhere classified) +CXX Unknown Cancer +C00 Malignant neoplasm of lip +C01 Malignant neoplasm of base of tongue +C02 Malignant neoplasm of other and unspecified parts of tongue +C03 Malignant neoplasm of gum +C04 Malignant neoplasm of floor of mouth +C05 Malignant neoplasm of palate +C06 Malignant neoplasm of other and unspecified parts of mouth +C07 Malignant neoplasm of parotid gland +C08 Malignant neoplasm of other and unspecified major salivary glands +C09 Malignant neoplasm of tonsil +C10 Malignant neoplasm of oropharynx +C11 Malignant neoplasm of nasopharynx +C12 Malignant neoplasm of pyriform sinus +C13 Malignant neoplasm of hypopharynx +C14 Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx +C15 Malignant neoplasm of oesophagus +C16 Malignant neoplasm of stomach +C17 Malignant neoplasm of small intestine +C18 Malignant neoplasm of colon +C19 Malignant neoplasm of rectosigmoid junction +C20 Malignant neoplasm of rectum +C21 Malignant neoplasm of anus and anal canal +C22 Malignant neoplasm of liver and intrahepatic bile ducts +C23 Malignant neoplasm of gallbladder +C24 Malignant neoplasm of other and unspecified parts of biliary tract +C25 Malignant neoplasm of pancreas +C26 Malignant neoplasm of other and ill-defined digestive organs +C30 Malignant neoplasm of nasal cavity and middle ear +C31 Malignant neoplasm of accessory sinuses +C32 Malignant neoplasm of larynx +C33 Malignant neoplasm of trachea +C34 Malignant neoplasm of bronchus and lung +C37 Malignant neoplasm of thymus +C38 Malignant neoplasm of heart, mediastinum and pleura +C39 Malignant neoplasm of other and ill-defined sites in the respiratory system and intrathoracic organs +C40 Malignant neoplasm of bone and articular cartilage of limbs +C41 Malignant neoplasm of bone and articular cartilage of other and unspecified sites +C42 hematopoietic and reticuloendothelial systems (ICD-O-3 specific) +C43 Malignant melanoma of skin +C44 Other malignant neoplasms of skin +C45 Mesothelioma +C46 Kaposi's sarcoma +C47 Malignant neoplasm of peripheral nerves and autonomic nervous system +C48 Malignant neoplasm of retroperitoneum and peritoneum +C49 Malignant neoplasm of other connective and soft tissue +C50 Malignant neoplasm of breast +C51 Malignant neoplasm of vulva +C52 Malignant neoplasm of vagina +C53 Malignant neoplasm of cervix uteri +C54 Malignant neoplasm of corpus uteri +C55 Malignant neoplasm of uterus, part unspecified +C56 Malignant neoplasm of ovary +C57 Malignant neoplasm of other and unspecified female genital organs +C58 Malignant neoplasm of placenta +C60 Malignant neoplasm of penis +C61 Malignant neoplasm of prostate +C62 Malignant neoplasm of testis +C63 Malignant neoplasm of other and unspecified male genital organs +C64 Malignant neoplasm of kidney, except renal pelvis +C65 Malignant neoplasm of renal pelvis +C66 Malignant neoplasm of ureter +C67 Malignant neoplasm of bladder +C68 Malignant neoplasm of other and unspecified urinary organs +C69 Malignant neoplasm of eye and adnexa +C70 Malignant neoplasm of meninges +C71 Malignant neoplasm of brain +C72 Malignant neoplasm of spinal cord, cranial nerves and other parts of central nervous system +C73 Malignant neoplasm of thyroid gland +C74 Malignant neoplasm of adrenal gland +C75 Malignant neoplasm of other endocrine glands and related structures +C76 Malignant neoplasm of other and ill-defined sites +C77 Secondary and unspecified malignant neoplasm of lymph nodes +C78 Secondary malignant neoplasm of respiratory and digestive organs +C79 Secondary malignant neoplasm of other sites +C80 Malignant neoplasm without specification of site +C81 Hodgkin's disease +C82 Follicular [nodular] non-Hodgkin's lymphoma +C83 Diffuse non-Hodgkin's lymphoma +C84 Peripheral and cutaneous T-cell lymphomas +C85 Other and unspecified types of non-Hodgkin's lymphoma +C86 Other specified types of T/NK-cell lymphoma +C88 Malignant immunoproliferative diseases +C90 Multiple myeloma and malignant plasma cell neoplasms +C91 Lymphoid leukaemia +C92 Myeloid leukaemia +C93 Monocytic leukaemia +C94 Other leukaemias of specified cell type +C95 Leukaemia of unspecified cell type +C96 Other and unspecified malignant neoplasms of lymphoid, haematopoietic and related tissue +C97 Malignant neoplasms of independent (primary) multiple sites +D00 Carcinoma in situ of oral cavity, oesophagus and stomach +D01 Carcinoma in situ of other and unspecified digestive organs +D02 Carcinoma in situ of middle ear and respiratory system +D03 Melanoma in situ +D04 Carcinoma in situ of skin +D05 Carcinoma in situ of breast +D06 Carcinoma in situ of cervix uteri +D07 Carcinoma in situ of other and unspecified genital organs +D09 Carcinoma in situ of other and unspecified sites +D10 Benign neoplasm of mouth and pharynx +D11 Benign neoplasm of major salivary glands +D12 Benign neoplasm of colon, rectum, anus and anal canal +D13 Benign neoplasm of other and ill-defined parts of digestive system +D15 Benign neoplasm of other and unspecified intrathoracic organs +D16 Benign neoplasm of bone and articular cartilage +D18 Haemangioma and lymphangioma, any site +D27 Benign neoplasm of ovary +D30 Benign neoplasm of urinary organs +D32 Benign neoplasm of meninges +D33 Benign neoplasm of brain and other parts of central nervous system +D34 Benign neoplasm of thyroid gland +D35 Benign neoplasm of other and unspecified endocrine glands +D36 Benign neoplasm of other and unspecified sites +D37 Neoplasm of uncertain or unknown behaviour of oral cavity and digestive organs +D38 Neoplasm of uncertain or unknown behaviour of middle ear and respiratory and intrathoracic organs +D39 Neoplasm of uncertain or unknown behaviour of female genital organs +D40 Neoplasm of uncertain or unknown behaviour of male genital organs +D41 Neoplasm of uncertain or unknown behaviour of urinary organs +D42 Neoplasm of uncertain or unknown behaviour of meninges +D43 Neoplasm of uncertain or unknown behaviour of brain and central nervous system +D44 Neoplasm of uncertain or unknown behaviour of endocrine glands +D45 Polycythaemia vera +D46 Myelodysplastic syndromes +D47 Other neoplasms of uncertain or unknown behaviour of lymphoid, haematopoietic and related tissue +D48 Neoplasm of uncertain or unknown behaviour of other and unspecified sites +O01 Hydatidiform mole38 +Death diff --git a/prepare_data.R b/prepare_data.R new file mode 100644 index 0000000..4328bed --- /dev/null +++ b/prepare_data.R @@ -0,0 +1,26 @@ +library(data.table) +setDTthreads(40) +library(readr) +field_id <- read.csv("field_id.txt", header = FALSE) +uid <- field_id$V1 +big_path <- "/mnt/storage/shared_data/UKBB/20230518-from-zhourong/HHdata_221103_0512.csv" +header_dt <- fread(big_path, nrows = 0) # 只读 0 行 ⇒ 只有列名 +all_names <- names(header_dt) +keep_names <- intersect(all_names,uid) +ukb_disease <- fread(big_path, + select = keep_names, + showProgress = TRUE) + +field_id <- read.csv("field_id.txt", header = FALSE) +uid <- field_id$V1 +big_path <- "/mnt/storage/shared_data/UKBB/20230518-from-zhourong/HH_data_220812_0512.csv" +header_dt <- fread(big_path, nrows = 0) # 只读 0 行 ⇒ 只有列名 +all_names <- names(header_dt) +keep_names <- intersect(all_names,uid) +ukb_others <- fread(big_path, + select = keep_names, + showProgress = TRUE) + +# merge disease and other data by "eid" +ukb_data <- merge(ukb_disease, ukb_others, by = "eid", all = TRUE) +fwrite(ukb_data, "ukb_data.csv") \ No newline at end of file diff --git a/prepare_data.py b/prepare_data.py new file mode 100644 index 0000000..dcc5b6f --- /dev/null +++ b/prepare_data.py @@ -0,0 +1,211 @@ +import pandas as pd # Pandas for data manipulation +import tqdm # Progress bar for chunk processing +import numpy as np # Numerical operations + +train_frac = 0.7 # Fraction of participants for training split +val_frac = 0.15 # Fraction of participants for validation split +test_frac = 0.15 # Fraction of participants for test split + +# CSV mapping field IDs to human-readable names +field_map_file = "field_ids_enriched.csv" +field_dict = {} # Map original field ID -> new column name +tabular_fields = [] # List of tabular feature column names +with open(field_map_file, "r", encoding="utf-8") as f: # Open the field mapping file + next(f) # skip header line + for line in f: # Iterate through lines + parts = line.strip().split(",") # Split by CSV commas + if len(parts) >= 3: # Ensure we have at least id and name columns (fix: was >=2) + # Original field identifier (e.g., "34-0.0") + field_id = parts[0] + field_name = parts[2] # Human-readable column name + field_dict[field_id] = field_name # Record the mapping + # Track as a potential tabular feature + tabular_fields.append(field_name) +# Exclude raw date parts and target columns +exclude_fields = ['year', 'month', 'Death', 'age_at_assessment'] +tabular_fields = [ + # Filter out excluded columns + field for field in tabular_fields if field not in exclude_fields] + +# TSV mapping field IDs to ICD10-related date columns +field_to_icd_map = "icd10_codes_mod.tsv" +# Date-like variables to be converted to offsets +date_vars = [] +with open(field_to_icd_map, "r", encoding="utf-8") as f: # Open ICD10 mapping + for line in f: # Iterate each mapping row + parts = line.strip().split() # Split on whitespace for TSV + if len(parts) >= 6: # Guard against malformed lines + # Map field ID to the date column name + field_dict[parts[0]] = parts[5] + date_vars.append(parts[5]) # Track date column names in order + +for j in range(17): # Map up to 17 cancer entry slots (dates and types) + # Cancer diagnosis date slot j + field_dict[f'40005-{j}.0'] = f'cancer_date_{j}' + field_dict[f'40006-{j}.0'] = f'cancer_type_{j}' # Cancer type/code slot j + +# Number of ICD-related date columns before adding extras +len_icd = len(date_vars) +date_vars.extend(['Death', 'date_of_assessment'] + # Add outcome date and assessment date + # Add cancer date columns + [f'cancer_date_{j}' for j in range(17)]) + +labels_file = "labels.csv" # File listing label codes +label_dict = {} # Map code string -> integer label id +with open(labels_file, "r", encoding="utf-8") as f: # Open labels file + for idx, line in enumerate(f): # Enumerate to assign incremental label IDs + parts = line.strip().split(' ') # Split by space + if parts and parts[0]: # Guard against empty lines + # Map code to index (0 for padding, 1 for checkup) + label_dict[parts[0]] = idx + 2 + +event_list = [] # Accumulator for event arrays across chunks +tabular_list = [] # Accumulator for tabular feature DataFrames across chunks +ukb_iterator = pd.read_csv( # Stream UK Biobank data in chunks + "ukb_data.csv", + sep=',', + chunksize=10000, # Stream file in manageable chunks to reduce memory footprint + # First column (participant ID) becomes DataFrame index + index_col=0, + low_memory=False # Disable type inference optimization for consistent dtypes +) +# Iterate chunks with progress +for ukb_chunk in tqdm.tqdm(ukb_iterator, desc="Processing UK Biobank data"): + # Rename columns to friendly names + ukb_chunk = ukb_chunk.rename(columns=field_dict) + # Require sex to be present + ukb_chunk.dropna(subset=['sex'], inplace=True) + + # Construct date of birth from year and month (day fixed to 1) + ukb_chunk['dob'] = pd.to_datetime( + # Guard against malformed dates + ukb_chunk[['year', 'month']].assign(DAY=1), errors='coerce' + ) + + # Use only date variables that actually exist in the current chunk + present_date_vars = [c for c in date_vars if c in ukb_chunk.columns] + + # Convert date-like columns to datetime and compute day offsets from dob + if present_date_vars: + date_cols = ukb_chunk[present_date_vars].apply( + pd.to_datetime, format="%Y-%m-%d", errors='coerce' # Parse dates safely + ) + date_cols_days = date_cols.sub( + ukb_chunk['dob'], axis=0) # Timedelta relative to dob + ukb_chunk[present_date_vars] = date_cols_days.apply( + lambda x: x.dt.days) # Store days since dob + + ukb_chunk = ukb_chunk.convert_dtypes() + + # Append tabular features (use only columns that exist) + present_tabular_fields = [ + c for c in tabular_fields if c in ukb_chunk.columns] + tabular_list.append(ukb_chunk[present_tabular_fields].copy()) + + # Process disease events from ICD10-related date columns + # Take ICD date cols plus 'Death' if present by order + icd10_cols = present_date_vars[:len_icd + 1] + # Melt to long form: participant id, event code (column name), and days offset + melted_df = ukb_chunk.reset_index().melt( + id_vars=['eid'], + value_vars=icd10_cols, + var_name='event_code', + value_name='days', + ) + # Require non-missing day offsets + melted_df.dropna(subset=['days'], inplace=True) + if not melted_df.empty: + melted_df['label'] = melted_df['event_code'].map( + label_dict) # Map event code to numeric label + # Fix: ensure labels exist before int cast + melted_df.dropna(subset=['label'], inplace=True) + if not melted_df.empty: + event_list.append( + melted_df[['eid', 'days', 'label']] + .astype(int) # Safe now since label and days are non-null + .to_numpy() + ) + + # Add assesment date as a "checkup" event (label=1) + if 'date_of_assessment' in ukb_chunk.columns: + assessment_array = ( + ukb_chunk.reset_index()[['eid', 'date_of_assessment']] + .dropna() + .assign(label=1) # Checkup label + .astype(int) + .to_numpy() + ) + if assessment_array.size > 0: + event_list.append(assessment_array) # Append checkup events + + df_res = ukb_chunk.reset_index() # Bring participant ID out of index + # Simplify stub names for wide_to_long + # Rename date stubs + rename_dict = {f'cancer_date_{j}': f'cancerdate{j}' for j in range(17)} + rename_dict.update( + # Rename type stubs + {f'cancer_type_{j}': f'cancertype{j}' for j in range(17)}) + df_renamed = df_res.rename(columns=rename_dict) # Apply renaming + stubs_to_use = [] # Collect available stubs + if any('cancerdate' in col for col in df_renamed.columns): + stubs_to_use.append('cancerdate') # Date stub present + if any('cancertype' in col for col in df_renamed.columns): + stubs_to_use.append('cancertype') # Type stub present + + if len(stubs_to_use) == 2: # Only proceed if both date and type columns exist + long_cancer = pd.wide_to_long( + df_renamed, + stubnames=stubs_to_use, + i=['eid'], # Participant ID identifier + j='cancer_num' # Index over cancer record number (0..16) + ).dropna() # Remove rows missing either date or type + if not long_cancer.empty: + long_cancer['cancer'] = long_cancer['cancertype'].str.slice( + 0, 3) # Use first 3 chars as code + long_cancer['cancer_label'] = long_cancer['cancer'].map( + label_dict) # Map to label id + cancer_array = ( + long_cancer.reset_index( + )[['eid', 'cancerdate', 'cancer_label']] + .dropna() + .astype(int) + .to_numpy() + ) + if cancer_array.size > 0: + event_list.append(cancer_array) # Append cancer events + +# Combine tabular chunks +final_tabular = pd.concat(tabular_list, axis=0, ignore_index=False) +final_tabular.index.name = 'eid' # Ensure index named consistently +data = np.vstack(event_list) # Stack all event arrays into one + +# Sort by participant then day +data = data[np.lexsort((data[:, 1], data[:, 0]))] + +# Keep only events with non-negative day offsets +data = data[data[:, 1] >= 0] + +# Remove duplicate (participant_id, label) pairs keeping first occurrence. +data = pd.DataFrame(data).drop_duplicates([0, 2]).values + +# Store compactly using unsigned 32-bit integers +data = data.astype(np.uint32) + +# Split data into train/val/test sets by participant ID +unique_ids = np.unique(data[:, 0]) # Unique participant IDs +# ID cutoff for train +train_split_id = unique_ids[int(len(unique_ids) * train_frac)] +# ID cutoff for val +val_split_id = unique_ids[int(len(unique_ids) * (train_frac + val_frac))] + +train_data = data[data[:, 0] <= train_split_id].tofile("ukb_train.bin") +val_data = data[(data[:, 0] > train_split_id) & ( + data[:, 0] <= val_split_id)].tofile("ukb_val.bin") +test_data = data[data[:, 0] > val_split_id].tofile("ukb_test.bin") +train_tabular = final_tabular[final_tabular.index <= train_split_id] +val_tabular = final_tabular[(final_tabular.index > train_split_id) & ( + final_tabular.index <= val_split_id)] +test_tabular = final_tabular[final_tabular.index > val_split_id] +train_tabular.to_csv("ukb_train_tabular.csv") +val_tabular.to_csv("ukb_val_tabular.csv") +test_tabular.to_csv("ukb_test_tabular.csv")